| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4051 |
|---|
| Symbol | |
|---|
| ID | 4480265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4866724 |
|---|
| End bp | 4868763 |
|---|
| Gene Length | 2040 bp |
|---|
| Protein Length | 679 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639728666 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_871674 |
|---|
| Protein GI | 117922482 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACC CTTTGCTTAA CGGCGCAAAA TTACCGCTTT TTTCCCAGAT TAAACCTGAA
CACATTCAAG TTGCCGTTGA GCAGGCCATT GCTCAGTGTC GTGCCAAGAT TGATGAAGTG
CTGCAAACCC CAGGGCCTTT TACCTGGGAT AACTTAGTCG CTCCGCTCGA GCAAGTGGAT
GATGAGTTAA GTCAGATTTG GTCGCCTGTC TCCCATATGA ACTCAGTGGT GAGCACAGAT
GAATGGCGCG CCGCCCATGA TGCTTGTTTG CCGCTGTTAT CCGAGTACGG CACCTATGTG
GGTCAACATC AAGGACTGTA TCAGGCCTAT AAATCCCTGC GTGCATCGGC AGATTTTGAC
CAATTAAGCC AAGCACAACA GATGGTGATT GAGCACAGCT TACGGGACTT CGAGCTTTCG
GGTATTGGCT TAGATGATGG GCAAAAAGTG CGTTATGGCG AAATCGTTAA ACGCCTATCC
GAGCTGACGA GCGGCTTTTC AAATCAATTA CTCGATGCGA CCCAAGCTTG GACTAAGTTA
ATTACCGACG AGGCAGAATT AGCTGGTTTA CCCGATTCAG CCAAGGCGGC CGCCAAAGCG
ATGGCCGAGG CCCGTGAATT AGAAGGTTGG TTATTTACCT TAGATTTCCC TTCCTATTTA
CCCGTGATGA CCTACAGCGA AAACCGTAGC CTGCGTGAAG AGTGTTATCG CGCCTTCGTG
ACGCGCGCTT CGGATCAAGG TCCAAATGCG GGCGAATTCG ATAATGGTCC CTTGATGGAC
GAAATCCTTG CGCTGCGCCA CGAGTTGGCA CAGTTGTTAG GCTTTGATAG TTTTGCCGAA
AAATCCCTCG CGACGAAAAT GGCCGAAACG CCAGCGCAGG TGATGGCATT CTTAAATGAA
TTAGCGCTGC GCTCAAAGGA TCAAGCCAAG GCCGAATTAG CCGATTTAAA AGCCTTTGCA
CTGGAGCAGT ACGGCGTGAG CGAAATGGCT TCTTGGGATT TGAGTTTCTA CGCCGAGAAG
TTACAGCAAC ATAAGTATGA GATTTCTCAA GAGTTGCTGC GCCCTTACTT CCCCGAAGAT
AAAGTGCTCT CTGGCTTGTT TTACACTGTC TCGCGCCTAT TTGGCTTAAA GATTGTCGAG
CAAACTGAGT TCGACCGTTG GCATAAAGAC GTGCGCTTCT TCGATATTTT CGACGAAACG
GGCGAACACA GAGGCAGCTT CTATTTAGAC CTATACGCCC GCACGGGTAA ACGTGGCGGC
GCTTGGATGG ATGATTGCCG AGTGCGTCGT CACACGCCTA CGGGTCTACA AAAGCCCGTG
GCTTATCTCA CCTGCAACTT TAATGGCCCA GTAGATGGCA AACCGGCACT CTTCACCCAC
GATGAAGTGA CGACGCTGTT CCACGAATTT GGTCATGGCA TTCACCATAT GCTAACCAAA
ATCGACGTGG CCGGCGTGTC AGGAATCAAC GGCGTGCCTT GGGATGCGGT CGAATTGCCT
AGCCAGTTTA TGGAAAACTG GTGCTGGCAA GAAGAAGCCT TAGCGGAGAT CTCCGGTCAC
TACGAAACCG GTGAGCCTTT ACCAAAAGCC ATGTTAGACA AGATGTTAGC GGCGAAAAAC
TTCCAATCAG GCATGATGAT GTTGCGCCAG CTGGAGTTTT CACTGTTCGA TTTTAGATTG
CACCACGAAT ATGACCCCGC CAAAGGGGCG CGTATTCAAG AGACCTTGGA CGAAGTCCGT
CGTCAGGTAG CCGTGTTAAT TCCGCCAGCA TTTAACCGTT TCCAACATGG TTTTGCGCAT
ATTTTTGCGG GCGGTTATGC CGCGGGTTAC TACAGCTACA AGTGGGCCGA AGTGCTGTCG
GCGGATGCGT TTTCTCGCTT CGAAGAGGAG GGCATCTTCA ATCCTGACAC GGGGCGTAGC
TTCCTGCACA ACATCCTCGA AATGGGTGGT TCAGCCGAGC CTATGGACTT GTTCAAACAG
TTTATGGGTC GCGAGCCGAG TATCGATGCG CTGCTGCGCC ACTCTGGGAT TGCTGCTTAA
|
|---|
| Protein sequence | MSNPLLNGAK LPLFSQIKPE HIQVAVEQAI AQCRAKIDEV LQTPGPFTWD NLVAPLEQVD
DELSQIWSPV SHMNSVVSTD EWRAAHDACL PLLSEYGTYV GQHQGLYQAY KSLRASADFD
QLSQAQQMVI EHSLRDFELS GIGLDDGQKV RYGEIVKRLS ELTSGFSNQL LDATQAWTKL
ITDEAELAGL PDSAKAAAKA MAEARELEGW LFTLDFPSYL PVMTYSENRS LREECYRAFV
TRASDQGPNA GEFDNGPLMD EILALRHELA QLLGFDSFAE KSLATKMAET PAQVMAFLNE
LALRSKDQAK AELADLKAFA LEQYGVSEMA SWDLSFYAEK LQQHKYEISQ ELLRPYFPED
KVLSGLFYTV SRLFGLKIVE QTEFDRWHKD VRFFDIFDET GEHRGSFYLD LYARTGKRGG
AWMDDCRVRR HTPTGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK
IDVAGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH YETGEPLPKA MLDKMLAAKN
FQSGMMMLRQ LEFSLFDFRL HHEYDPAKGA RIQETLDEVR RQVAVLIPPA FNRFQHGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFNPDTGRS FLHNILEMGG SAEPMDLFKQ
FMGREPSIDA LLRHSGIAA
|
|---|
| |