Gene Shewana3_4018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4018 
SymbolenvZ 
ID4480232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4827452 
End bp4828768 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content52% 
IMG OID639728633 
Productosmolarity sensor protein 
Protein accessionYP_871641 
Protein GI117922449 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA AGTTTTGGTG GCGCTTTCTT CCCCGCAGCG CCTTTAGCCA AACCGTTATG 
CTGATTGGTT GTCTACTGTT GATCAATCAG CTGGTCTCCT ATGTCACTGT GGCTGTGTAT
GTGTTAAAGC CCAGTTATCA GCAAATCAAT CAGTTAATTG CCCGCCAAAT CAATTTGTTA
TTTGTCGATG GTATCGATAT CGGCCGCGAA CACTTAACCA TAGTCGATGC GCTCAATGCC
AAAGTCCGTG ACGATGGCAT GAAGGTTTAC AACCAACAAC AGGCCCGCGA GGCGGGAATC
GAACAGGCCA CCTACTACGG TTTTTGGTCA TCACAGATGT CGGAATACCT TGGTGGCGAT
GCTGAAGTTC GCGTCACCCA CGGCACGGTA TTACAAATTT GGATCCGCCC GCCGCAGGCG
CCTTCGGTGT GGATTAAAGT GCCACTCATC GGGCAAAACG TTTCCGACCT GTCACCACTT
ACCTTGTACT TAATGGTGAT AGGTGCGCTC AGTGTCGCCG GTGGATGGTG GTTTGCCCGC
CAGCAAAATA GGCCACTCAG ACGCTTACAA AAAGCCGCAA TAGCAGTCTC CCGCGGTGAG
TTTCCCGAAC CTTTGCCGCT TAAAGGCTCC AGCGAACTGG TCGAGGTAAC CAATGCCTTC
AACCAGATGT CCCACAGCAT GAAACAGCTC GAACAGGACA GAGCCCTGTT GATGGCGGGA
ATTTCCCACG ATTTACGCAC GCCACTGACG CGCATTCGCC TCGCCTCCGA GATGATGGTC
GAAGAAGATC AATATCTTAA AGACGGTATC GTCAACGATA TCGAAGATAT GGACGCCATT
ATCAGCCAGT TTATTGCCTA TATTCGCCAA GATCAGGAGG CGAGCCGCGA GCCCGGGCAA
ATTAATAAAC TCATTCAAGA TATCGCGCAG GCCGAAGCCA ACCGCGACGG TCAAATTGAA
GTCGTACTGA GCGACTGCCC CGAGGCCCTA TTTCAAGGGC TGGCGATTAA GCGGGTGCTC
AGCAATCTGG TCGAAAATGC CTTCCGTTAT GGTTCGGGCT GGGTGCGAAT CAGCTCGCAA
TTTGATGGCA AGCGGATCGG TTTTAGCGTT GAGGATAATG GCCCCGGGAT TGATGAATCA
CAAATTCCCA AACTGTTTCA GCCATTTACC CAAGGCGATA TTGCACGCGG CAGTGTCGGC
TCTGGCCTAG GCCTCGCCAT CATCAAACGG ATTATCGACC GTCACCAAGG CCAAGTGACC
TTATCTAACC GCACTGAGGG CGGCTTAAAA GCCCAAGTCT GGCTCCCCCT GGAATAA
 
Protein sequence
MKPKFWWRFL PRSAFSQTVM LIGCLLLINQ LVSYVTVAVY VLKPSYQQIN QLIARQINLL 
FVDGIDIGRE HLTIVDALNA KVRDDGMKVY NQQQAREAGI EQATYYGFWS SQMSEYLGGD
AEVRVTHGTV LQIWIRPPQA PSVWIKVPLI GQNVSDLSPL TLYLMVIGAL SVAGGWWFAR
QQNRPLRRLQ KAAIAVSRGE FPEPLPLKGS SELVEVTNAF NQMSHSMKQL EQDRALLMAG
ISHDLRTPLT RIRLASEMMV EEDQYLKDGI VNDIEDMDAI ISQFIAYIRQ DQEASREPGQ
INKLIQDIAQ AEANRDGQIE VVLSDCPEAL FQGLAIKRVL SNLVENAFRY GSGWVRISSQ
FDGKRIGFSV EDNGPGIDES QIPKLFQPFT QGDIARGSVG SGLGLAIIKR IIDRHQGQVT
LSNRTEGGLK AQVWLPLE