| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4001 |
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| Symbol | |
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| ID | 4480215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4803122 |
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| End bp | 4804489 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728617 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_871625 |
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| Protein GI | 117922433 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG CAAAATCCAC CGCACTCGCG CTCCTGTTGA ATGGCACCAA GAATCGCCAG
CTGCTCGCGC TTGCCCTGCC GATGATCCTC TCCAATATCA CGGTTCCGCT GTTGGGATTA
GTCGATACGG CTGTCATCGG GCATTTAAGT GACGCCTATT ATTTAGGGGG CGTTGCACTC
GGGTCAACGA TTATCACATT AATCATTTGG TTATTAGGCT TTTTACGGAT GGCGACCACG
GGATTGGTCG CACAGGCCTA TGGCGCAAAT GATCTTAACG CCCAATTAAA ATTGCTAGTC
CAAGGCGCCA TGTTGGCGAC AGGGCTGGGT ATCGCGGTGA TCCTATTGCA GATCCCGATA
CTGAATTTAT CGCTTAGCCT CTCCGAGGCG AGTGTCGAAG TGGAGCGTTA TTGCCGAGAA
TATTTTCAAG TCCGCGTTTG GTCGACGCCA TTCGCCCTGC TCAACTTAGT GATGCTCGGC
TGGCTCCTTG GCAGACAACA ACCTAAGGCG GCCATGTGGC AGCTTATCTT CGCCAACGTA
GCCAATATTA TCCTCGATGT ACTGTTTGTA ATCGGATTTG GCTGGGACGT TAAAGGAGCG
GCACTCGCCT CAGTATGTGC GGATATCACC GCCTTTAGCG TTGCGCTCTA CATGGTATTA
CAACAACTTA AACTGTCGTC TCAGTTTACA TTTGGCCACT TGCGTATCCA TCTAACGTTT
GTCGGTTACG GCCAGCTGCT TAGGCTCAAT ACAGATATTT TTATCCGCAG CCTGTGCCTG
CAAGCCGCCT TCGCCTTTAT GACCTTTCAC GGTGCGGGCC TTGGGGATAA TACGGTCGCA
GCCAATGCGG TGTTATTGAA TTTACTGTTA TTAATCGCCT ACGCCCTCGA TGGCATTGCC
TATTATGCCG AGGCGGAAGT GGGCAAAGCC TACGGACAAA AACGCACACA ACCACTGCGC
GAAGCAGTAC TCCTGGCTTG GTGTTGGTCC GCCATCTCTG CATTGGGTTT CAGTCTGATA
TTTTATCTTT TCGGCGACCG TATCATCGGG CTGCTAACCA ATATTGATGA GGTGAGAACC
ACAGCGCAAA TTTATCTGCC TTGGCTGATA TTACTGCCGC TTTGGTCTTT TAGTTCCTAT
CTGTTTGATG GGGTTTATAT TGGCGCCGCT AAGGGTAAAG TGATGCGTAA CAGTATGATT
ATCGCTACAT TTGGCGCCTT CTTCCCGGCA TGGTATTTGC TGCAGTCGCT GTTACCTTCC
GAGCAGGCTA ACCATGCACT ATGGGCGGCC ATGACGGCCT TTATGCTAAC GCGCAGCCTC
ACCCTAGCGA CACATTACCG CTTTAGCAAG GCATTTATTC TTAATTAG
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| Protein sequence | MTTAKSTALA LLLNGTKNRQ LLALALPMIL SNITVPLLGL VDTAVIGHLS DAYYLGGVAL
GSTIITLIIW LLGFLRMATT GLVAQAYGAN DLNAQLKLLV QGAMLATGLG IAVILLQIPI
LNLSLSLSEA SVEVERYCRE YFQVRVWSTP FALLNLVMLG WLLGRQQPKA AMWQLIFANV
ANIILDVLFV IGFGWDVKGA ALASVCADIT AFSVALYMVL QQLKLSSQFT FGHLRIHLTF
VGYGQLLRLN TDIFIRSLCL QAAFAFMTFH GAGLGDNTVA ANAVLLNLLL LIAYALDGIA
YYAEAEVGKA YGQKRTQPLR EAVLLAWCWS AISALGFSLI FYLFGDRIIG LLTNIDEVRT
TAQIYLPWLI LLPLWSFSSY LFDGVYIGAA KGKVMRNSMI IATFGAFFPA WYLLQSLLPS
EQANHALWAA MTAFMLTRSL TLATHYRFSK AFILN
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