Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3987 |
Symbol | |
ID | 4480201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4787676 |
End bp | 4788932 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728603 |
Product | aromatic amino acid transporter |
Protein accession | YP_871611 |
Protein GI | 117922419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACC ATATGAATGC GGTGAAGAAT AAGCCGGTGG GCAAGTCTTT GCTCGGTGGT GCCATGATTA TTGCCGGCAC CACAGTCGGG GCGGGGATGT TTTCTTTGCC TGTGGTGGGA GCAGGCATGT GGTTTGGCTA CTCGGTACTG ATGTTACTCG GTATTTGGTT CTGCATGTTG ATGTCGGGGC TGTTACTGCT CGAAACCAAC CTGCATTTCG AGCCGGGAGC GAGTTTCGAT ACCCTGACCA AGGAAACCCT AGGCCAGTTC TGGCGGATCG TGAATGGGGT ATCGATTGCC TTCGTGCTCT ACATCTTAAC CTATGCCTAC ATCAGTGGCG GCGGCTCGAT TGTTAACCAT AGCCTGCAGG GTATGGGGAT TGAGTTACCC CAAAGTGTTG CCGGATTAGT GTTTGCGGTC GTGCTGGCTT GTATCGTGTT GATCAGCACC AAGGCGGTGG ACCGTATTAC GACCATAATG CTCGGCGGGA TGATCATCAC TTTCTTCCTT GCGATTGGTA ACTTATTGAT CGAGATCGAT GTGACTAAAT TACTCGAGCC GGATGGTAAT CAAAGCTTTA TGCCTTATCT ATGGGCTGCC TTGCCCTTTG GTCTGGCAAG TTTTGGCTAC CATGGCAACG TGCCGAGTTT GGTGAAGTAC TACGGCAAAG ATTCATCGAC CATCATCAAA GCGATTTTCG TCGGCACTTT CATCGCGCTG ATCATTTATG CCTGCTGGTT AGTGGCCACT ATGGGCAACA TTCCTCGCAG CCAGTTTAGT GAGATTATTG CCCAGGGTGG CAATATGGGT GTGTTAGTCG GCGCCTTGTC GAAAGTGATG GAAAGTAGCT GGTTAAACAG CATGTTAACC CTGTTTGCTA ACTTAGCTGT GGCATCTTCT TTCCTCGGTG TGACCTTAGG TTTATTCGAT TATTTGGCCG ATTTATTCGG GTTCGACGAT ACGCGCTCGG GGCGGATGAA AACGGCAATT GTCACCTTTG TGCCGCCGAC CATTTTAGGT TTGTTATTCC CCGATGGCTT TTTGATTGCC ATAGGTTTTG CTGCCTTAGC GGCAACCGTG TGGGCCGTCA TCGTGCCTGC ACTGATGGCC TATAAATCGA GACAGCAGTT CCCTAATCAT CAAGGTTTTA GAGTCTTTGG TGGCACGCCC TTAATTATCC TTGTGGTGTT ATACGGTGTG GTGACTGGGG CTTGTCATCT ACTCGCGATG GCGAATTTAT TGCCGCAGTT CTCCTAA
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Protein sequence | MANHMNAVKN KPVGKSLLGG AMIIAGTTVG AGMFSLPVVG AGMWFGYSVL MLLGIWFCML MSGLLLLETN LHFEPGASFD TLTKETLGQF WRIVNGVSIA FVLYILTYAY ISGGGSIVNH SLQGMGIELP QSVAGLVFAV VLACIVLIST KAVDRITTIM LGGMIITFFL AIGNLLIEID VTKLLEPDGN QSFMPYLWAA LPFGLASFGY HGNVPSLVKY YGKDSSTIIK AIFVGTFIAL IIYACWLVAT MGNIPRSQFS EIIAQGGNMG VLVGALSKVM ESSWLNSMLT LFANLAVASS FLGVTLGLFD YLADLFGFDD TRSGRMKTAI VTFVPPTILG LLFPDGFLIA IGFAALAATV WAVIVPALMA YKSRQQFPNH QGFRVFGGTP LIILVVLYGV VTGACHLLAM ANLLPQFS
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