| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3982 |
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| Symbol | |
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| ID | 4480196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4778484 |
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| End bp | 4779986 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639728598 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_871606 |
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| Protein GI | 117922414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAT TTCACAAAGT AAAAAAGCCG GGCCCTAAGG CAGTATTGAT ACTCAGCAGT
TTACTGATGG GTACGCCTTG GTTAACCCAG GCCCAGCTCG CGAATCCTGC CACTCAAGCA
GAGGCAGGCC ACGAGCATGC GCACGATAGT CACAGTGCAA ATCAAGTCAA AACCTATACT
TGCCCTATGC ACCCCGAAGT CGAAAGCCAC GAACCCGGTC GTTGCCCTAA GTGCAATATG
TTCCTCGTTG AAAAAGAAGA AGAGGAAGAA GCCAGTACGG CCGCCCAACA CGCAGAGCAT
CAAGCGGCAA ACCAAAATGC GGCGCAAGTC TTTGATACAC CAACACCCAA AGCGAATAGC
TTAGTTAAAA GCCAAAGCTC GGGTGCGACC ATTAAATATG TCTGCCCTAT GCACGCCCAC
ATTATTAGTG ATGTGCCAGG CACTTGCCCT ATCTGCGGGA TGAATTTAGA AAAGGTTGAA
ACTGGCGGCA ATACTCAGGA AATCAACATT AATGTCTCTG GCAGCATGCA ACAGGCGCTT
GCGCTGAAAG TCGCAGAGGC AAAACGCGAT ACCCTGTGGA AATTTGTCGA AACCGTCGGC
CAAATTGACT ACGACGAGAG CCAAATCAAC CATGTGCACG CCCGTGTAAC TGGCTGGATT
GAGAAGCTGA TGATCAAATC GGTGGGCGAC TCAGTTAAAA AAGGCCAGTT ACTATACGAG
ATCTATTCAC CCGATCTGAT TAACGCCCAG GATGATTATC TGTTAGCACT CGATACCGCC
AAATCTGCGG GTAACAGTGG CCGTTATCAG GATTTAGTCC GCAAAGCCGG GCTGCGTTTA
TCGCTGCTTG GCATGAATGA AAAACAAATC CAACAACTTG CAGACTCACG CAAAACCCAA
TACCGCGTGC CTTTCTATGC CCTGCAAGAT GGTATTGTTA AAGAGTTAGC TGTGCGTGAT
GGCATGTATA TCCAACCGTC AACCGAGGTG ATGTCGGTTG TCGATCTCTC CAAAGTCTGG
GTAATTGCCG ACGTGTTTGA AAATGAGCAA AGCTGGATTG CCGTGGGTCA AAAGGCCGAA
GTTTCAGTCC CCGCGATGAA TATCAGCGGT ATCGAAGGCA CGATTGACTA TATCTATCCC
GAGCTGGACC CCGTCACCCG CAGCTTAAGA GTACGCGTGG TGCTGAATAA TACCGATATT
TCCCTAAGAC CTAAGACGCT CGCCAAGGTC TCGCTCTTCG GCGGCCCGAA TAAAGATGTG
TTAGTGATCC CGCAGGAAGC CCTAATCCAA ACGGGTAAAG AAAACCGCGT GATAGTAAAA
CAGGCCGATG ACAGCTTCAC CGCTAAGGCC GTGACGGTCG GCATGATGAG CCAAGGTAAG
GCAGAGATAG TCTCGGGCCT GAGTGAAGGT GAACGCGTGG TGACATCGGG ACAATTCCTA
CTCGACTCCG AGGCCAGCCT CAAGGGCAGC TTAATGCGTT TAAGCAGCGG CCATCAGCAC
TAG
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| Protein sequence | MNQFHKVKKP GPKAVLILSS LLMGTPWLTQ AQLANPATQA EAGHEHAHDS HSANQVKTYT
CPMHPEVESH EPGRCPKCNM FLVEKEEEEE ASTAAQHAEH QAANQNAAQV FDTPTPKANS
LVKSQSSGAT IKYVCPMHAH IISDVPGTCP ICGMNLEKVE TGGNTQEINI NVSGSMQQAL
ALKVAEAKRD TLWKFVETVG QIDYDESQIN HVHARVTGWI EKLMIKSVGD SVKKGQLLYE
IYSPDLINAQ DDYLLALDTA KSAGNSGRYQ DLVRKAGLRL SLLGMNEKQI QQLADSRKTQ
YRVPFYALQD GIVKELAVRD GMYIQPSTEV MSVVDLSKVW VIADVFENEQ SWIAVGQKAE
VSVPAMNISG IEGTIDYIYP ELDPVTRSLR VRVVLNNTDI SLRPKTLAKV SLFGGPNKDV
LVIPQEALIQ TGKENRVIVK QADDSFTAKA VTVGMMSQGK AEIVSGLSEG ERVVTSGQFL
LDSEASLKGS LMRLSSGHQH
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