Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3957 |
Symbol | |
ID | 4480171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4756056 |
End bp | 4756667 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728573 |
Product | TonB family protein |
Protein accession | YP_871581 |
Protein GI | 117922389 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCAAA ATGCACTCGT TAATCGCACA GGTATTATCC TTGTTAGCGC ACTGATCACC TTAGGTTTGT TCGTGTTTAT GGCGCAACTT ATCCATAATC CGCAGCCCTT GAGCGGACAA GCGAGCGATG CGCCGCAGAT CACTATTTTG ATGACGGAGC GAACGCCAAT TCCGCCGAAG GAAAGCCGTA AACCTGAGCC ACCTAAACCC ATTCCGGCAA GGGAGCGCGT TACCGCTCAG GGTGAGAGCA ATCAGCTCGT CGATTTCAAT ACTCAGACTT TTCCCCCTGA AATGCCAACC CAAACCACAC TCTTTACTCA ATCGGCAATG ACTGCAGAAG CCTTACCTGT GGTGCAAGTG TCCCCTCGCT ATCCTATTGA TGCGGCACAA AATGGTAAGG AAGGTTATGT AGTCGTGGGA TTTGATATTA CGGCGGATGG TACTGTTAGC AATGTGCGCG TGCTCGATGC CAACCCGAAG CGGGTGTTTG ATAAGGCGGC GTTGTCGGCG GTGCAAAACT GGAAATACAA GCCTAAGTTT GACTCGGGCA AGGCCGTGCC ACAGATGAAT CAACAGGTGC AGCTCGACTT TAAACTGGAT CAGAAGATTT AA
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Protein sequence | MGQNALVNRT GIILVSALIT LGLFVFMAQL IHNPQPLSGQ ASDAPQITIL MTERTPIPPK ESRKPEPPKP IPARERVTAQ GESNQLVDFN TQTFPPEMPT QTTLFTQSAM TAEALPVVQV SPRYPIDAAQ NGKEGYVVVG FDITADGTVS NVRVLDANPK RVFDKAALSA VQNWKYKPKF DSGKAVPQMN QQVQLDFKLD QKI
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