Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3949 |
Symbol | |
ID | 4480163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4747704 |
End bp | 4748663 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728565 |
Product | LysR family transcriptional regulator |
Protein accession | YP_871573 |
Protein GI | 117922381 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTCG ACAACTTAGC CAGAATCGAT CTCAACCTAC TGGTGATATT GAAGGTTTTG CTCGAAGAAC AGAGTGTCAC CCGCGCAGCG AGTCGATTAC ATATTAGCCA GTCAGCATTG AGCAAGAGCT TGAATCGCCT GCGAGAAACC TTAGATGATC CCCTGTTCCA ACGCACTGCC CATGGCCTTA AACCCACGGC GCACGCGCTC AATATTGGGC TCAAGTTGCC AAATATTTTG CAAGACTTAT ATCAACTCAC TCAGCCGCCA ACGTTTACAC CGGCCAGCAG TAACAGGCAG TTTTCCTTTG CCATGGTTGA AAGCGCCTAC GAAACCTTAA TTCCCTATTT TATCGGCCCA TTGTTAAGCA CTGCGCCGAA TCTGAAGCTC GACTCCTATG TGTGGACCGA GAAATCGATG CACGATTTGC AGCAGGGGCA AATTGACTTT GGGATCTCGG GACGGGATCT ACACCCGCTG TCAGACTCGC AAACGGACAG ACTCCCAGAT GGCATTAGCT GCCAAACCCT GTTTACCGAC AGGCAAGTGT GTTTGGTGCG CCAAGATCAT CCTTTGATGA CCGCACTCAT CTCGCCCCAG TGGGATTTAA ATTTATATTT GGATATGGCG CATGTGCAGG TGCGCTGTGA AGGGAGTGAT TGGTGGGCGC TGGATTACTT TCTAGCCGAC CTTGGCCACA GGCGCAAAAT CAGCACGACT GTGCCCGATT TTTATGGCGC GGCCAGCATC TGTGCCCACA GTGATTTGAT TTTTACCTTA CCATCGAGCT TTGCACTGCA CGCATGCAAG CTGTATCCAC TGAGGCTGTT GCCTCTGCCC TTTGAATTTA TCCCTATGGC CTATGTGCTG CTTTGGCATC AGCGCAACGA TGAAGACCAA GGCCATAAAT GGATGCGCGA TACCATCTGC CAAAGTGTTG AAAAGCTTAT GCAACCCTAA
|
Protein sequence | MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA HGLKPTAHAL NIGLKLPNIL QDLYQLTQPP TFTPASSNRQ FSFAMVESAY ETLIPYFIGP LLSTAPNLKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSQTDRLPD GISCQTLFTD RQVCLVRQDH PLMTALISPQ WDLNLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRKISTT VPDFYGAASI CAHSDLIFTL PSSFALHACK LYPLRLLPLP FEFIPMAYVL LWHQRNDEDQ GHKWMRDTIC QSVEKLMQP
|
| |