Gene Shewana3_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3949 
Symbol 
ID4480163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4747704 
End bp4748663 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content50% 
IMG OID639728565 
ProductLysR family transcriptional regulator 
Protein accessionYP_871573 
Protein GI117922381 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG ACAACTTAGC CAGAATCGAT CTCAACCTAC TGGTGATATT GAAGGTTTTG 
CTCGAAGAAC AGAGTGTCAC CCGCGCAGCG AGTCGATTAC ATATTAGCCA GTCAGCATTG
AGCAAGAGCT TGAATCGCCT GCGAGAAACC TTAGATGATC CCCTGTTCCA ACGCACTGCC
CATGGCCTTA AACCCACGGC GCACGCGCTC AATATTGGGC TCAAGTTGCC AAATATTTTG
CAAGACTTAT ATCAACTCAC TCAGCCGCCA ACGTTTACAC CGGCCAGCAG TAACAGGCAG
TTTTCCTTTG CCATGGTTGA AAGCGCCTAC GAAACCTTAA TTCCCTATTT TATCGGCCCA
TTGTTAAGCA CTGCGCCGAA TCTGAAGCTC GACTCCTATG TGTGGACCGA GAAATCGATG
CACGATTTGC AGCAGGGGCA AATTGACTTT GGGATCTCGG GACGGGATCT ACACCCGCTG
TCAGACTCGC AAACGGACAG ACTCCCAGAT GGCATTAGCT GCCAAACCCT GTTTACCGAC
AGGCAAGTGT GTTTGGTGCG CCAAGATCAT CCTTTGATGA CCGCACTCAT CTCGCCCCAG
TGGGATTTAA ATTTATATTT GGATATGGCG CATGTGCAGG TGCGCTGTGA AGGGAGTGAT
TGGTGGGCGC TGGATTACTT TCTAGCCGAC CTTGGCCACA GGCGCAAAAT CAGCACGACT
GTGCCCGATT TTTATGGCGC GGCCAGCATC TGTGCCCACA GTGATTTGAT TTTTACCTTA
CCATCGAGCT TTGCACTGCA CGCATGCAAG CTGTATCCAC TGAGGCTGTT GCCTCTGCCC
TTTGAATTTA TCCCTATGGC CTATGTGCTG CTTTGGCATC AGCGCAACGA TGAAGACCAA
GGCCATAAAT GGATGCGCGA TACCATCTGC CAAAGTGTTG AAAAGCTTAT GCAACCCTAA
 
Protein sequence
MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA 
HGLKPTAHAL NIGLKLPNIL QDLYQLTQPP TFTPASSNRQ FSFAMVESAY ETLIPYFIGP
LLSTAPNLKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSQTDRLPD GISCQTLFTD
RQVCLVRQDH PLMTALISPQ WDLNLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRKISTT
VPDFYGAASI CAHSDLIFTL PSSFALHACK LYPLRLLPLP FEFIPMAYVL LWHQRNDEDQ
GHKWMRDTIC QSVEKLMQP