Gene Shewana3_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3944 
Symbol 
ID4480158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4741918 
End bp4742556 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content49% 
IMG OID639728560 
Productmethyltransferase type 11 
Protein accessionYP_871568 
Protein GI117922376 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCT GTCCCCTTTG CCATAGTGCC GATTTAGTGA CCTACCACCA AGATAAACGC 
CGTCGTTACC AACAGTGCCA GCAGTGCGCC CTGGTGAGTG TACCTACCGA ATTTTATCTA
AGCCCAGAAG CCGAAAAGGC CGAATACGAT AAGCACGAAA ATCACCCGCA GGATCTCGGT
TATCAGCAGT TTCTAGACAG AACCCTCGCT CCTTTGTTGG CTCGCGTTTC CCCTTCGGCT
GCTGGGCTCG ATTTTGGTTG TGGCGAGGGC AAAGCATTGA GTCTGATGGC GCAAACGCGG
GGTTATCGGG TCGAAAACTA CGATCTCTAT TACGCCAATC ACCCCGAATT ACTCACGCGG
CAATACGATT TCATTACCCT GACAGAGGTC ATTGAGCATG TGAGTGATGC CGATGCGTTA
CTAACCTTAT TAAACACCTT GCTCAAGCCC AAAGGCATTT TAGCCGTGAT GACCAAGCGA
GTGCTCAACC CCACGGCCTT TAGCACTTGG CATTATAAAA ATGATCCCAC CCATATTAAC
TTTTACTCCG AAGCTACCTT TCAATGGCTC GCCGAGCATT ACGGCTGGCA GCTGGAAATC
ATCGACAAAG ACGTCGTGTT TTTGCATAAA GCTAATTAA
 
Protein sequence
MNICPLCHSA DLVTYHQDKR RRYQQCQQCA LVSVPTEFYL SPEAEKAEYD KHENHPQDLG 
YQQFLDRTLA PLLARVSPSA AGLDFGCGEG KALSLMAQTR GYRVENYDLY YANHPELLTR
QYDFITLTEV IEHVSDADAL LTLLNTLLKP KGILAVMTKR VLNPTAFSTW HYKNDPTHIN
FYSEATFQWL AEHYGWQLEI IDKDVVFLHK AN