Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3929 |
Symbol | |
ID | 4480143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4722110 |
End bp | 4724101 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639728545 |
Product | enterobactin receptor protein |
Protein accession | YP_871553 |
Protein GI | 117922361 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.881798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTTAC GTCGTAAAAA GATCCTCGCA CAGCTAGTTT CTGCCGCATT ATTGCTACCC GCCACTCAGG TTTTGGCGGA TGCCGCACCC GATCAAGACA AGATGATGGA AAGAATCGTT GTTACCGCAT CGGGTTTCGA GCAGCAAGTG CGTGACGCGC CCGCTTCTAT CAGCGTGCTC ACCCGGGAGG ATCTCGATAC ACGTTTTTAC CGTGACTTAA CCGACGCCAT GTTAGAAGTG CCCGGCGTGG TGGTGACTGG CGGTGCTGAC CGTCGGGACA TTAGTTTGCG GGGCATGGGC AGCCAATACA CGCTGATCCT CGTCGATGGT AAACGTCAGT CTTCCCGCGA GACCCGCACC AACAGCGACG GTCCTGGTGT TGAAGGCGCT TGGACGCCGC CGCTCGCCGC AATCGATAGG ATTGAAATTG TCCGCGGCCC CATGTCATCC CTTTATGGCT CCGATGCTAT CGGTGGGGTG ATCAACATTA TCACCCGTAA AGTGCCCAAT GAGTGGCAGG GGGAATTGCG CCTCGACACT ACGCTGCAGG AAAAGTCGGA CTCAGGTAAT GTGTATCAGG GCAACTTTTT TGTGAACGGT GGCTTGATTA AAGATCTGCT CGGCGTGCAG TTATACGGCC AATACACTCA ACGTGAAGAA GATAGTATCT ACGGCGGTTA CCGAGGTCGC GATGCGGATA ATCTCACCGC CAGATTTGCC CTCACGCCTA ACCAAGACCA TGACATTATG TTAGAAGTCG GCATCGCCAA CCAAGAGTTG GATAGCACCT TAGGGAAAAC CGTTGCACCA TTGGCACCGG GCGCCAGTTG TGGCCGCAGT GGTTGCCCAG CTTCGTCGAC AACCGAGTAT GAAAACAGCA CCATTTCCCT ATCGCACACC GGGCGTTGGG ACTTTGGTAC CTCGGATACT TATATCAAGC ACGAAGTATT TGATAACAAG TCCCGCAAGA TGAAGATCAA GAATACCGAT GCTCAAACTA GCCTGATCGC CACCTTGGGG GAAAGCCATA CCACAACCTT TGGCGCGGCC TTCAATAAGC AAGATCTTAC CGATGAAACG GGCAATCAGG TCAGTGACTT AACCGATATT AGTCGCCGCC AATGGTCGGT GTTCTCAGAG GATGAATGGC GTATCGTCGA TAATTTTGCC TTAACCTTAG GCCTGCGTTT AGACGATGAT GAAAACTTTG GCGACCACCT CAGCCCACGG ATTTACGGCG TATGGGGGCT GACCGAGCAC ACCACCTTAA AAGGCGGTGT GTCGACGGGC TTTAGGGCGC CGAGCCTGAG GCAAACTGTG CCCGATTGGG GGCAGGTAAG CCGAGGCGGC AATATGTACG GTAACCCGGA TTTACAACCC GAAACCTCAG TGAACTATGA GCTAGGCATT TACACCGATC TCACTGACTC CATCACCACC AGTGCAGGCG TGTTCTATAA CGAGTTTGAG GACAAGATCA CCCGTGTCGC TTGCCCTGCG ACTCAATGTA CCGATGGGCC TAATCAGTTT GGCTCTGACC CGACCACCTA TGTGAATATT GATGAGGCGG TCACCCAGGG GGTTGAGTTC AGTATCGACT ATAAAATCTT GAGCAACTTG GCATTAACGG GCAACTACAC TTATACCGAC TCGGAGCAGA AGACGGGCGC ATATAAAGGT AGTCCATTGA ATCAATTGCC TAAACATCTG GTGCAATTGT CGGTTAACTA TGAGCCGATA GATAAGTTAA GCACTTGGCT GCGGGTTAAC TATCGTGGTG AAGAGAGTCA GCCGACAACG GGTCCTTCTT CAAGCAGCTT GATTGCGCCT TCCTATACGC TGTTAGATTT AGGGGCCAAC TATCGCGTTA ATGACAGCAT TAAGTTCAGC GCGGGTATTT ATAACGCCTT CGATAAGGAC ATCACGGAAG AAGAGTACGG TTATATCGAA GACGGCCGTC GTTACTGGTT AGGCATGACC TATAGCTTTT AA
|
Protein sequence | MLLRRKKILA QLVSAALLLP ATQVLADAAP DQDKMMERIV VTASGFEQQV RDAPASISVL TREDLDTRFY RDLTDAMLEV PGVVVTGGAD RRDISLRGMG SQYTLILVDG KRQSSRETRT NSDGPGVEGA WTPPLAAIDR IEIVRGPMSS LYGSDAIGGV INIITRKVPN EWQGELRLDT TLQEKSDSGN VYQGNFFVNG GLIKDLLGVQ LYGQYTQREE DSIYGGYRGR DADNLTARFA LTPNQDHDIM LEVGIANQEL DSTLGKTVAP LAPGASCGRS GCPASSTTEY ENSTISLSHT GRWDFGTSDT YIKHEVFDNK SRKMKIKNTD AQTSLIATLG ESHTTTFGAA FNKQDLTDET GNQVSDLTDI SRRQWSVFSE DEWRIVDNFA LTLGLRLDDD ENFGDHLSPR IYGVWGLTEH TTLKGGVSTG FRAPSLRQTV PDWGQVSRGG NMYGNPDLQP ETSVNYELGI YTDLTDSITT SAGVFYNEFE DKITRVACPA TQCTDGPNQF GSDPTTYVNI DEAVTQGVEF SIDYKILSNL ALTGNYTYTD SEQKTGAYKG SPLNQLPKHL VQLSVNYEPI DKLSTWLRVN YRGEESQPTT GPSSSSLIAP SYTLLDLGAN YRVNDSIKFS AGIYNAFDKD ITEEEYGYIE DGRRYWLGMT YSF
|
| |