Gene Shewana3_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3925 
Symbol 
ID4480139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4718083 
End bp4719012 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content48% 
IMG OID639728541 
Productbile acid:sodium symporter 
Protein accessionYP_871549 
Protein GI117922357 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID[TIGR00841] bile acid transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTAATA TCAACCGCTT TTTTCCGCTA TTTGCCTTAC TCGGGGCGGG TACGGCGTAT 
TTGATGCCCG CATGGTTTAG CGGATTGAAA ACCAGCATAG TGCCGTTGCT GGTGGTGATT
ATGTTATCTA TGGGACTGAC CTTAGATGTG CGGGATTTTG CCTATGCATT CAAACAGAAA
CGTGCCGTTA TCACTGGCTT AATCTTGCAA TTTACCCTGA TGCCCTTAAG CGCCTTAGCC
ATTAGTTTAC TATTAGGGTT CAATCGGGAA TTGACCATAG GCATGGTGTT GGTGGGGAGT
GTGGCGGGTG GCACTGCATC GAACGTGATT TGCTATTTGG CCAAGGGCGA TGTCGCCTTA
TCTATCACTA TGACTGCGCT ATCCACCTTA GCGGGTGTGG TGCTCACTCC CTTGATTATT
GAGCTATTAA TCGGTGAGAT GGTCGCCATT CCTTTAATGG ATATGCTAGT CAGTCTCGTT
AAAATCGTGC TTATCCCTGT GACTGTGGGT GTGGTGTTGA ATCACTTCTT TAAACCGCAA
GTGGCTAAAC TTGCCCCCGC ATTGCCCATC ATTTCTATCG TGGCGATTGT ACTGGCCATC
AGCATTATTG TGGCCCTAAA TGCAGGGCAA TTTTCGCAGG TGGGGCCTGT GATTTTACTC
GCGGTGTTTC TACATAATGG TTTGGGACTC GCCTTGGGTT ATACCTGCTG CCGCTTGCTC
GGCTTTAACC ATACAGTATG TAAAACCATT TCGATTGAGG TGGGGTTGCA AAACTCAGGC
CTTGCGACCG CATTATGCAT CAAGTTTTTT AGCCCGCTCT CCGCCGTCCC CAGCGCGATT
TTCTCGATTT GGCATAACCT TTCAGGTGCG ATGTTGGCAG GATATTGGGC GAGCTTAGAG
CAGAAGAAAC AGAGCGATGG ATTGGAATAA
 
Protein sequence
MVNINRFFPL FALLGAGTAY LMPAWFSGLK TSIVPLLVVI MLSMGLTLDV RDFAYAFKQK 
RAVITGLILQ FTLMPLSALA ISLLLGFNRE LTIGMVLVGS VAGGTASNVI CYLAKGDVAL
SITMTALSTL AGVVLTPLII ELLIGEMVAI PLMDMLVSLV KIVLIPVTVG VVLNHFFKPQ
VAKLAPALPI ISIVAIVLAI SIIVALNAGQ FSQVGPVILL AVFLHNGLGL ALGYTCCRLL
GFNHTVCKTI SIEVGLQNSG LATALCIKFF SPLSAVPSAI FSIWHNLSGA MLAGYWASLE
QKKQSDGLE