Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3925 |
Symbol | |
ID | 4480139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4718083 |
End bp | 4719012 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639728541 |
Product | bile acid:sodium symporter |
Protein accession | YP_871549 |
Protein GI | 117922357 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTTAATA TCAACCGCTT TTTTCCGCTA TTTGCCTTAC TCGGGGCGGG TACGGCGTAT TTGATGCCCG CATGGTTTAG CGGATTGAAA ACCAGCATAG TGCCGTTGCT GGTGGTGATT ATGTTATCTA TGGGACTGAC CTTAGATGTG CGGGATTTTG CCTATGCATT CAAACAGAAA CGTGCCGTTA TCACTGGCTT AATCTTGCAA TTTACCCTGA TGCCCTTAAG CGCCTTAGCC ATTAGTTTAC TATTAGGGTT CAATCGGGAA TTGACCATAG GCATGGTGTT GGTGGGGAGT GTGGCGGGTG GCACTGCATC GAACGTGATT TGCTATTTGG CCAAGGGCGA TGTCGCCTTA TCTATCACTA TGACTGCGCT ATCCACCTTA GCGGGTGTGG TGCTCACTCC CTTGATTATT GAGCTATTAA TCGGTGAGAT GGTCGCCATT CCTTTAATGG ATATGCTAGT CAGTCTCGTT AAAATCGTGC TTATCCCTGT GACTGTGGGT GTGGTGTTGA ATCACTTCTT TAAACCGCAA GTGGCTAAAC TTGCCCCCGC ATTGCCCATC ATTTCTATCG TGGCGATTGT ACTGGCCATC AGCATTATTG TGGCCCTAAA TGCAGGGCAA TTTTCGCAGG TGGGGCCTGT GATTTTACTC GCGGTGTTTC TACATAATGG TTTGGGACTC GCCTTGGGTT ATACCTGCTG CCGCTTGCTC GGCTTTAACC ATACAGTATG TAAAACCATT TCGATTGAGG TGGGGTTGCA AAACTCAGGC CTTGCGACCG CATTATGCAT CAAGTTTTTT AGCCCGCTCT CCGCCGTCCC CAGCGCGATT TTCTCGATTT GGCATAACCT TTCAGGTGCG ATGTTGGCAG GATATTGGGC GAGCTTAGAG CAGAAGAAAC AGAGCGATGG ATTGGAATAA
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Protein sequence | MVNINRFFPL FALLGAGTAY LMPAWFSGLK TSIVPLLVVI MLSMGLTLDV RDFAYAFKQK RAVITGLILQ FTLMPLSALA ISLLLGFNRE LTIGMVLVGS VAGGTASNVI CYLAKGDVAL SITMTALSTL AGVVLTPLII ELLIGEMVAI PLMDMLVSLV KIVLIPVTVG VVLNHFFKPQ VAKLAPALPI ISIVAIVLAI SIIVALNAGQ FSQVGPVILL AVFLHNGLGL ALGYTCCRLL GFNHTVCKTI SIEVGLQNSG LATALCIKFF SPLSAVPSAI FSIWHNLSGA MLAGYWASLE QKKQSDGLE
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