Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3878 |
Symbol | |
ID | 4480088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4658311 |
End bp | 4658817 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639728491 |
Product | hypothetical protein |
Protein accession | YP_871502 |
Protein GI | 117922310 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0647843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAATT TCGCCGCTGG GCTTAACAAC TTTTGGGTGG GATTATTCAC GGGGATCATG CTGCCGCTGA TTATCGTCGC GGGATTGTTA TACGCCACCG TCGATAAATT CACCGGACTC ATAGAAGACG CTGCCATCGC GCCTTTAATT AGTCGCAGCG AACAGACCTT CGACAGAGTC GATAATCTGC TTCTCACCTT AGACAATAAA GTCGACGACG CAAATTTAAA GGACTTAGCA CTCTTAGCCC CGTTAAAGAA CGCGCAATTG TTCCCAGAAC TACAGGCACT CTCCAGTGGA ATCACTAACC TCAAACAGAC AGTCACAGAT ATCGATAAGC AAGCCGTATT AGCAAACCTG CAGGAAAAAC TGCAAGCCTC ACTGGCGACC AAATTCCCCG AGGATAAAGC GAAAGAACTC GCTCAGAATC TTATCAATAT TGCGCAAGTG CTTGCGAGTG AACAAAAACA CTTATCGGCA GCAGTAGAAC AAACACCGAA TAATTAA
|
Protein sequence | MKNFAAGLNN FWVGLFTGIM LPLIIVAGLL YATVDKFTGL IEDAAIAPLI SRSEQTFDRV DNLLLTLDNK VDDANLKDLA LLAPLKNAQL FPELQALSSG ITNLKQTVTD IDKQAVLANL QEKLQASLAT KFPEDKAKEL AQNLINIAQV LASEQKHLSA AVEQTPNN
|
| |