Gene Shewana3_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3878 
Symbol 
ID4480088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4658311 
End bp4658817 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content46% 
IMG OID639728491 
Producthypothetical protein 
Protein accessionYP_871502 
Protein GI117922310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0647843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TCGCCGCTGG GCTTAACAAC TTTTGGGTGG GATTATTCAC GGGGATCATG 
CTGCCGCTGA TTATCGTCGC GGGATTGTTA TACGCCACCG TCGATAAATT CACCGGACTC
ATAGAAGACG CTGCCATCGC GCCTTTAATT AGTCGCAGCG AACAGACCTT CGACAGAGTC
GATAATCTGC TTCTCACCTT AGACAATAAA GTCGACGACG CAAATTTAAA GGACTTAGCA
CTCTTAGCCC CGTTAAAGAA CGCGCAATTG TTCCCAGAAC TACAGGCACT CTCCAGTGGA
ATCACTAACC TCAAACAGAC AGTCACAGAT ATCGATAAGC AAGCCGTATT AGCAAACCTG
CAGGAAAAAC TGCAAGCCTC ACTGGCGACC AAATTCCCCG AGGATAAAGC GAAAGAACTC
GCTCAGAATC TTATCAATAT TGCGCAAGTG CTTGCGAGTG AACAAAAACA CTTATCGGCA
GCAGTAGAAC AAACACCGAA TAATTAA
 
Protein sequence
MKNFAAGLNN FWVGLFTGIM LPLIIVAGLL YATVDKFTGL IEDAAIAPLI SRSEQTFDRV 
DNLLLTLDNK VDDANLKDLA LLAPLKNAQL FPELQALSSG ITNLKQTVTD IDKQAVLANL
QEKLQASLAT KFPEDKAKEL AQNLINIAQV LASEQKHLSA AVEQTPNN