| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3871 |
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| Symbol | |
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| ID | 4480081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4646982 |
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| End bp | 4649144 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639728484 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_871495 |
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| Protein GI | 117922303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0955234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TAAAAGTTGC CGCCAGCTTA TCTGTTAGAT CATGTTTTGA AATAGACAGA
GAAGTTGTCA ATGTATTAAC CACAGATTTT TGCGATGTGG GCGCGGCTGT AGTCTCTGTT
GATGATGTTA AAAATGGTAT TGTTGAAAAA ATTAAAAATA CCGGATTAAA ACTGCCTATT
TTCGTATCAG TTTGTTGTGA AGAAACCTTC CCAGATGATA TTTGCTCTTC TATTACCGGG
GTATTTGAGC TCTGCGGTAG CAATACCGAT TTCTATGGTA AACAGGTCGA AACCGCCGTC
CAAAAATATG AACAAGCCCT ATTACCGCCT TTCTTTGGCA CACTGAAAAA ATACGTGGAA
ATGGGCAACT CCACCTTCGC CTGTCCAGGC CATCAGGGTG GTCAATTCTT CCGTAAACAT
CCTGTGGGTC GCCAATTTTT CGATTTCTTT GGCGAAACCA TTTTCCGCTC AGATATGTGT
AATGCCGACG TTAAACTCGG CGATCTATTA ATCCACGAAG GCGCGCCGCT GGATGCACAA
AAATACGCGG CTAAGGTCTT TAACGCCGAT AAAACCTACT TTGTGCTCAA CGGCACTTCT
TCTTCAAACA AAGTGGCGAC CAACGCACTG CTGGCGAAGG GCGACCTGGT ATTATTCGAC
CGTAACAACC ATAAATCCAA CCACCATGGC GCGTTAATTC AAGCCGGTGC AACACCGATT
TATTTAGAAA CCGCCCGTAA CCCCTTCGGC TTTATTGGTG GTATCGACGC CCACTGCTTC
CAAGAGTCTT ATTTAAGGGA ACAAATCCGC GCCGTTGCAC CTGAGCGTGC CGATGAACAA
CGTCCATTCC GCTTAGCCAT TATCCAACTA GGCACCTACG ACGGTACTAT CTACAATGCT
CGCCAAGTCG TTGATCGTAT TGGACATCTA TGTGATTACA TCCTGTTTGA CTCAGCTTGG
GTTGGCTACG AGCAATTTAT TCCTATGATG AATGACTGCT CGCCTCTGCT GCTCGAACTG
ACGCCTGAAG ATCCCGGTAT TATCGTGACT CAGTCAGTGC ACAAACAGCA GGCAGGCTTC
TCACAAACCT CGCAAATTCA CAAAAAAGAC TCACATATCA AAGGCCAAGC CAGATACTGC
AACCATAAAC GCTTCAACAA CGCCTTTATG ATGCATGCCT CTACCAGCCC CTTCTATCCG
CTGTTTGCCG CATTGGATGT GAACGCTAAA ATGCACGAAG GCGCCAGCGG CCGTTATCTA
TGGCGTGAGG CGGTTAAAGC TGGTATTGAA GCTCGCAAGT TACTGCTCAA AAAATGTAAA
TATATCAAGC CATTTATCCC AAGCATGATC GAGGGACGCC CATGGCAGGA TTATCCAACC
GAACAAATGG CCGATGATTT ACGTTTCTTC GAGTTTGAAC CCGGACAAAA ATGGCACTCC
TTCGACGGTT ACGAAAAAGG CCAATATTTC GTAGACCCTT GTAAGTTCCT ATTAACCACG
CCTGGTATCG ATGCCGAAAC CGGTAAATAT ACTGAGTTCG GTATTCCTGC AACTATTCTG
GCTAACTTCT TACGTGAAAA TAATATTATT CCCGAGAAGT GCGACTTAAA TTCGATTTTA
TTCCTGATGA CACCTGCGGA AGATATGGCG AAGATGCAAC ACTTAGTGTC GCAAATATCT
CGCTTCGAGA AATTAGTCGA TGAAGATGCG CCATTATCTG AAGTATTACC TAACGTCTAT
AACGCTAATA AAGCCCGTTA TAAAGACTAT ACCATTCGTC AACTCTGCCA AGAAATGCAC
AACCTTTATG TCAGCCATGA CGTAAAACAA CTGCAAAAAG AAATGTTCCG CCAGGCGCAT
TTCCCAACAA AAGTGATGGA TCCACAGGAA GCCAACCTCG AGTTTATCCG TGGCAAAGTG
GAGTTAGTGC CACTGTCACA AATTGAGGGA CGCATTGCTG CAGAAGGTGC ATTGCCTTAT
CCACCTGGAG TGTTATGTGT GGTCCCAGGT GAAATATGGG GCGGCGCGGT ACAACGTTAT
TTCTTAGCCC TTGAAGAAGG CATCAACTTA TTACCCGGAT TCTCCCCTGA ATTACAAGGT
GTTTACCTCG AAACCCCCCC AGACGGAAAA ATCCAAGCCC TAGGTTATGT ATTAAATAAA
TAA
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| Protein sequence | MKSLKVAASL SVRSCFEIDR EVVNVLTTDF CDVGAAVVSV DDVKNGIVEK IKNTGLKLPI
FVSVCCEETF PDDICSSITG VFELCGSNTD FYGKQVETAV QKYEQALLPP FFGTLKKYVE
MGNSTFACPG HQGGQFFRKH PVGRQFFDFF GETIFRSDMC NADVKLGDLL IHEGAPLDAQ
KYAAKVFNAD KTYFVLNGTS SSNKVATNAL LAKGDLVLFD RNNHKSNHHG ALIQAGATPI
YLETARNPFG FIGGIDAHCF QESYLREQIR AVAPERADEQ RPFRLAIIQL GTYDGTIYNA
RQVVDRIGHL CDYILFDSAW VGYEQFIPMM NDCSPLLLEL TPEDPGIIVT QSVHKQQAGF
SQTSQIHKKD SHIKGQARYC NHKRFNNAFM MHASTSPFYP LFAALDVNAK MHEGASGRYL
WREAVKAGIE ARKLLLKKCK YIKPFIPSMI EGRPWQDYPT EQMADDLRFF EFEPGQKWHS
FDGYEKGQYF VDPCKFLLTT PGIDAETGKY TEFGIPATIL ANFLRENNII PEKCDLNSIL
FLMTPAEDMA KMQHLVSQIS RFEKLVDEDA PLSEVLPNVY NANKARYKDY TIRQLCQEMH
NLYVSHDVKQ LQKEMFRQAH FPTKVMDPQE ANLEFIRGKV ELVPLSQIEG RIAAEGALPY
PPGVLCVVPG EIWGGAVQRY FLALEEGINL LPGFSPELQG VYLETPPDGK IQALGYVLNK
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