Gene Shewana3_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3869 
Symbol 
ID4480079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4645536 
End bp4646084 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content51% 
IMG OID639728482 
ProductPBP family phospholipid-binding protein 
Protein accessionYP_871493 
Protein GI117922301 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0607284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCATT TACATAAGTG GATAGTCGGA GTTGGCTTAT TAACGGCGGC ATTCGGCTCG 
GCGCAGGCCA TGACCTTATC GAGTAAAGAT ATTGGTGAAG GTCAGCAATT ATCGAATCAA
TTTGTTTTTA ATGGGTTTGG CTGTAATGGT GAGAATCTTT CTCCCGAACT CACTTGGAGC
GGCGCACCAA AGGGCACAAA AGCCTATGCG GTGACAGCCT ATGATCCCGA TGCGCCTACG
GGCAGTGGTT GGTGGCACTG GGCCGTTTAC AATATTAACG GCGATCAACA ACAGCTAGCC
CAAGGTGCGG GCTCTAAAGC CAATGCCTTA CCTAAGGGAG CGATTGCGCT AAAGAATGAC
TTTGGCACCA CCGATTTTGG TGGCGCTTGC CCGCCGCAGG GGCATGGTAT GCACAGATAT
ATATTTACTG TGTGGGCGCT AGCCTCGCCA TTAGCGTTAC CTAAAGAGGC ATCTCCTGCG
CTATTAGGCT TTATGCTCAA TGCGCAGGCC TTAGGCAGCG CTAAGCTGAC CGCTGTGTAT
CAGCGTTAA
 
Protein sequence
MMHLHKWIVG VGLLTAAFGS AQAMTLSSKD IGEGQQLSNQ FVFNGFGCNG ENLSPELTWS 
GAPKGTKAYA VTAYDPDAPT GSGWWHWAVY NINGDQQQLA QGAGSKANAL PKGAIALKND
FGTTDFGGAC PPQGHGMHRY IFTVWALASP LALPKEASPA LLGFMLNAQA LGSAKLTAVY
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