| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3862 |
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| Symbol | |
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| ID | 4480072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4638394 |
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| End bp | 4640247 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639728475 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_871486 |
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| Protein GI | 117922294 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.015096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACT TCGAGGATGA GTTCAGTGAG TCTGAATTAG TCAAGCAGCC CGATACCCCT
ATTCAATATG TGAAGTTAGA GGATACAGCA CTAGTCAAAA GAGACTTAGA TACCTTTCCT
GACTTTTTAA AAAGCAAAGC GCTCGATAAA TACCAGCTCA TTGCCTTCAT CGAAAAAACA
ATCACTGGTG GATGGACTCA AAAAAATCTA GACCCAATTC TTGATGTTCT TTTTACTACC
ACCACGGACA GGCGGCCGAA TTGGCGAACG TTAGTACGTT GGCGTAAAAG CTACATTGAC
AGTAACGGCG ATCTTGCGTC ATTAGTCGCT AAGCGGCATA AAATGGGCAA TAGAACGAGT
AGAGTTAAGG GAGATGAAGT ATTTTTTGAG CAAGCCCTAA CTCGTTTTTT AGATGCTAAA
AGGCCTAAAG TATCTACAGC ATATCAGTAC TATAAAGATG CCATCACAAT CGAAAATGAG
AGCATTGTTG ATGGACAAAT TCCTATCATT TCTTATAAAA GTTTTAACCA AAGAATAAAG
TCATTACCTC CTTATCCTGT TGCAGTGGCG CGGCATGGTA AATTTAAAGC AGATCAATGG
TTTGCTTATT GCTCTTCCCA TATTCCCCCA ACGCGAATAT TAGAACGGGT AGAAATCGAT
CATACCCCAC TAGATCTAAT CCTGATTGAC GATGAATTAT CTATCCCACT TGGCAGGCCA
TATTTAACCT TAATCATCGA TGTTTTTAGT GGTTGTGTTT TGGGGTTTCA CTTAAGTTAT
CGCTCGCCTT CATATGTTTC AGCTGCCAAG GCAATCGTGC ATGCCATAAA ACCAAAATCA
TTTGAAGGTC TTGATATCGA GCTTCAAAAT GAGTGGCCTT GCTTTGGTAA ATTTGAAAAT
CTAGTTGTGG ATAATGGAGC TGAGTTTTGG TCGAAGAGTT TAGAGCATGC CTGCAAAGAG
GCAGGAATAA ACATTCAATA TAACCCAGTT CGTAAACCTT GGTTAAAGCC TTTTGTAGAA
CGTTTTTTTG GGATGATTAA CGAATACTTT TTAACCGAAA TACCAGGTAA AACCTTCTCG
AATATCCTAG CAAAAGAAGA CTTTAAACCG GAAAAAGACG CCATCATGCG CTTCTCTACT
TTTGTTGAAG AATTTCATCG CTGGATTGTT GATATTTATC ATCAAGATTC AAACTCACGC
GAAACACGAA TTCCTATAAA ACAGTGGCAG CGTGGCTTTG ATATTTACCC ACCACTAAAG
ATGAGCGCAG AGGATGAACA ACGGTTTACT GTGCTGATGG GTATTTCAGA TGAGCGAACA
TTAACCAGAA ACGGTTTTAA ATTTGAAGAG TTAATGTATG ACTCTACTGC TTTGGCCGAT
TACAGAAAGC ATTACCCACA AACCAAAGAA ACCATCAAAA AAATCATTAA AGTCGACCCT
GATGATCTAT CGAGTATCCA TGTTTACCTC GAGGAATTAG GCGGTTATCT TAAAGTCCCC
TGTACTGATA ATAGTGATTA TACCCACGGT TTGAGCCTTC ATGAGCATAA AGTGATTAAG
AAAATTAATC GTGAGATTAT TCGGGAAGGG AAGGATGATT TGGGATTAGC TAAAGCGCGT
ATGGCAATTC ATGCTCGAGT AAAGCAAGAG CAAGAAGCGT TTCAAATATC TAATACAAAA
GCGAAAATTT CAGGGGTTAA GAAGCAAGCT CAACTTGCAG ATGTGAGTAA TACCGGTCAG
GGGACAATAC GCCTCGAAAG CGAAGAATTG CTCCCTTCTT TACCTAAAAA ATCAGAATCT
AATATTAGTA ATCTTCTCGA GCACTGGGAT GATGATGTAG AGGCTTTTGA GTGA
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| Protein sequence | MMDFEDEFSE SELVKQPDTP IQYVKLEDTA LVKRDLDTFP DFLKSKALDK YQLIAFIEKT
ITGGWTQKNL DPILDVLFTT TTDRRPNWRT LVRWRKSYID SNGDLASLVA KRHKMGNRTS
RVKGDEVFFE QALTRFLDAK RPKVSTAYQY YKDAITIENE SIVDGQIPII SYKSFNQRIK
SLPPYPVAVA RHGKFKADQW FAYCSSHIPP TRILERVEID HTPLDLILID DELSIPLGRP
YLTLIIDVFS GCVLGFHLSY RSPSYVSAAK AIVHAIKPKS FEGLDIELQN EWPCFGKFEN
LVVDNGAEFW SKSLEHACKE AGINIQYNPV RKPWLKPFVE RFFGMINEYF LTEIPGKTFS
NILAKEDFKP EKDAIMRFST FVEEFHRWIV DIYHQDSNSR ETRIPIKQWQ RGFDIYPPLK
MSAEDEQRFT VLMGISDERT LTRNGFKFEE LMYDSTALAD YRKHYPQTKE TIKKIIKVDP
DDLSSIHVYL EELGGYLKVP CTDNSDYTHG LSLHEHKVIK KINREIIREG KDDLGLAKAR
MAIHARVKQE QEAFQISNTK AKISGVKKQA QLADVSNTGQ GTIRLESEEL LPSLPKKSES
NISNLLEHWD DDVEAFE
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