Gene Shewana3_3850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3850 
Symbol 
ID4480060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4623021 
End bp4623644 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content34% 
IMG OID639728463 
ProductTetR family transcriptional regulator 
Protein accessionYP_871474 
Protein GI117922282 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.349935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAA AAAAAATAAC TAAATCTTCG CGTGGACGTC CAGTTGGTGA TCATGATGAA 
AAAAGAAATG AGTTGCTTTG TACAGCGATT AATTTGCTTG TCACTGATGG TTATGCAGGA
TTGTCGATGC GTAACCTTGC AAGTAAAGCG CAGGTAACTA CAGGTGCTAT TACTTACTAT
TTTTCTAATA AAAGTGAGTT AATGAAAGGA GTTTCGGATG AATTATTTAA TAGGTTTTCG
CTTTTATTAG CTAAAAATAC TGAAATTGAT ATAAAACAGG CTGTAGAGGA GTGGATTAAC
TGGACTTATA GTGATGGTGG TGAAATATGG AAAGCTTTTT TACAAGTGCA ATTCTATGCT
GCCGAAGATA AAACTTTTAT TGATTATGCC CAAAAAAGGT ATGACATTTT CATTTCCCAA
CTAAAACATT TTATAGAGAG TGGACAAAAG TCCAAACAAA TTAGAAATGA CATCCCTGCA
GAAATACTAG CCGAACAGTT AAGTGCTATG GGAGATGGCA TGATGATAAT GCAATCTATT
TATCCAGAAA GGTTGTCGAT AGAAAAAATT GCTCAATTTA AAAAAGGTAT ACTTAGCCTC
ATTAGTCCAC AACTTGCCGT GTGA
 
Protein sequence
MNTKKITKSS RGRPVGDHDE KRNELLCTAI NLLVTDGYAG LSMRNLASKA QVTTGAITYY 
FSNKSELMKG VSDELFNRFS LLLAKNTEID IKQAVEEWIN WTYSDGGEIW KAFLQVQFYA
AEDKTFIDYA QKRYDIFISQ LKHFIESGQK SKQIRNDIPA EILAEQLSAM GDGMMIMQSI
YPERLSIEKI AQFKKGILSL ISPQLAV