Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3850 |
Symbol | |
ID | 4480060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4623021 |
End bp | 4623644 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639728463 |
Product | TetR family transcriptional regulator |
Protein accession | YP_871474 |
Protein GI | 117922282 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.349935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAA AAAAAATAAC TAAATCTTCG CGTGGACGTC CAGTTGGTGA TCATGATGAA AAAAGAAATG AGTTGCTTTG TACAGCGATT AATTTGCTTG TCACTGATGG TTATGCAGGA TTGTCGATGC GTAACCTTGC AAGTAAAGCG CAGGTAACTA CAGGTGCTAT TACTTACTAT TTTTCTAATA AAAGTGAGTT AATGAAAGGA GTTTCGGATG AATTATTTAA TAGGTTTTCG CTTTTATTAG CTAAAAATAC TGAAATTGAT ATAAAACAGG CTGTAGAGGA GTGGATTAAC TGGACTTATA GTGATGGTGG TGAAATATGG AAAGCTTTTT TACAAGTGCA ATTCTATGCT GCCGAAGATA AAACTTTTAT TGATTATGCC CAAAAAAGGT ATGACATTTT CATTTCCCAA CTAAAACATT TTATAGAGAG TGGACAAAAG TCCAAACAAA TTAGAAATGA CATCCCTGCA GAAATACTAG CCGAACAGTT AAGTGCTATG GGAGATGGCA TGATGATAAT GCAATCTATT TATCCAGAAA GGTTGTCGAT AGAAAAAATT GCTCAATTTA AAAAAGGTAT ACTTAGCCTC ATTAGTCCAC AACTTGCCGT GTGA
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Protein sequence | MNTKKITKSS RGRPVGDHDE KRNELLCTAI NLLVTDGYAG LSMRNLASKA QVTTGAITYY FSNKSELMKG VSDELFNRFS LLLAKNTEID IKQAVEEWIN WTYSDGGEIW KAFLQVQFYA AEDKTFIDYA QKRYDIFISQ LKHFIESGQK SKQIRNDIPA EILAEQLSAM GDGMMIMQSI YPERLSIEKI AQFKKGILSL ISPQLAV
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