Gene Shewana3_3813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3813 
Symbol 
ID4480023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4579718 
End bp4580101 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content49% 
IMG OID639728426 
Productputative endoribonuclease L-PSP 
Protein accessionYP_871437 
Protein GI117922245 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.805449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA AAATCATTAT CGCGACCGAA AACGCCCCAG CGGCAATTGG CACTTATTCT 
CAAGCGGTTA AAGTCGGCAG CACAGTATAT TTATCCGGCC AAATCCCACT AGTGCCAAGC
ACAATGCAGA TCGTGAGCGA TGATTTTGAG GCGCAAGTTG TGCAAGTGTT TGAAAACTTA
ACGGCCGTTT GTACCGCAGC TGGCGGCACG ATCAACGATA TCGTTAAGCT CAATATCTTC
CTAACGGACT TAAGCCACTT CGCAAAAGTG AATGAAATCA TGAGCCGTTA CTTCAGCCAA
CCTTACCCTG CTCGCGCCGC TATCGGTGTG AAGCAGCTGC CTAAGGATGC GCAAGTCGAA
ATGGATGGCG TGATGGAGCT GTAA
 
Protein sequence
MAEKIIIATE NAPAAIGTYS QAVKVGSTVY LSGQIPLVPS TMQIVSDDFE AQVVQVFENL 
TAVCTAAGGT INDIVKLNIF LTDLSHFAKV NEIMSRYFSQ PYPARAAIGV KQLPKDAQVE
MDGVMEL