Gene Shewana3_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3789 
Symbol 
ID4479999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4552570 
End bp4553277 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID639728402 
Producthypothetical protein 
Protein accessionYP_871413 
Protein GI117922221 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAGA TTGAAGTAAT CAAACAAGCG GGCTACGAGG TGCGGGTTGA ACGTACCTCG 
CGCCGTAAAT CCGCCACCAT TAAAGTGGAG GAGGGCGTGG TTGCTGTGGT TGTGCCCAAA
GCGCTGTCAT CGGAGAAAGT CCACCAGCTG GTGGCCGCTA AACATCAATG GATTCTCGAA
AAGTTGGCGA TTCATGCGGA GGCGCGGCCA TTGCGTGGCA AGGAGTATGT CTCTGGCGAA
GCATTCCCTT ATTTAGGTCG TAACTATCGC TTGAAAGTCG TTAGCGGCAA AGTGAGCCCG
ACCAAATTGG TTGATGGGAA AATTACCGTT ACTGTGCCTG AATATGCCAA GCAAGCGCAT
TTTGTGCGCC GAGCGTTAGT CCACTGGTAT AAGCGCAACG CTGATAAGAA AATCCGCGAG
AAGGTAGACC GTTATCAATC GGTAGTGGGC GTAGACACGG CGATTGTGCG TATCAAAGAC
TTTAAAAGTC GGTGGGGCAG TTGTACCCCT TACGGCGACT TAGAATTTAA CTGGTTGATT
GTGTTAGCAC CTAACCGTAT CGTTGATTAT GTTGTCGTAC ATGAGCTTTG CCATCTGCTG
CATCATGACC ACTCGCCACA ATTCTGGAAA GAGGTTGAGC GGGTGATGCC CGATTACCGT
GAGTGTAAAG AGTGGTTGCG AGATAACGCT CAATTGCTGG TGGTGTAG
 
Protein sequence
MQEIEVIKQA GYEVRVERTS RRKSATIKVE EGVVAVVVPK ALSSEKVHQL VAAKHQWILE 
KLAIHAEARP LRGKEYVSGE AFPYLGRNYR LKVVSGKVSP TKLVDGKITV TVPEYAKQAH
FVRRALVHWY KRNADKKIRE KVDRYQSVVG VDTAIVRIKD FKSRWGSCTP YGDLEFNWLI
VLAPNRIVDY VVVHELCHLL HHDHSPQFWK EVERVMPDYR ECKEWLRDNA QLLVV