Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3789 |
Symbol | |
ID | 4479999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4552570 |
End bp | 4553277 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639728402 |
Product | hypothetical protein |
Protein accession | YP_871413 |
Protein GI | 117922221 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGA TTGAAGTAAT CAAACAAGCG GGCTACGAGG TGCGGGTTGA ACGTACCTCG CGCCGTAAAT CCGCCACCAT TAAAGTGGAG GAGGGCGTGG TTGCTGTGGT TGTGCCCAAA GCGCTGTCAT CGGAGAAAGT CCACCAGCTG GTGGCCGCTA AACATCAATG GATTCTCGAA AAGTTGGCGA TTCATGCGGA GGCGCGGCCA TTGCGTGGCA AGGAGTATGT CTCTGGCGAA GCATTCCCTT ATTTAGGTCG TAACTATCGC TTGAAAGTCG TTAGCGGCAA AGTGAGCCCG ACCAAATTGG TTGATGGGAA AATTACCGTT ACTGTGCCTG AATATGCCAA GCAAGCGCAT TTTGTGCGCC GAGCGTTAGT CCACTGGTAT AAGCGCAACG CTGATAAGAA AATCCGCGAG AAGGTAGACC GTTATCAATC GGTAGTGGGC GTAGACACGG CGATTGTGCG TATCAAAGAC TTTAAAAGTC GGTGGGGCAG TTGTACCCCT TACGGCGACT TAGAATTTAA CTGGTTGATT GTGTTAGCAC CTAACCGTAT CGTTGATTAT GTTGTCGTAC ATGAGCTTTG CCATCTGCTG CATCATGACC ACTCGCCACA ATTCTGGAAA GAGGTTGAGC GGGTGATGCC CGATTACCGT GAGTGTAAAG AGTGGTTGCG AGATAACGCT CAATTGCTGG TGGTGTAG
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Protein sequence | MQEIEVIKQA GYEVRVERTS RRKSATIKVE EGVVAVVVPK ALSSEKVHQL VAAKHQWILE KLAIHAEARP LRGKEYVSGE AFPYLGRNYR LKVVSGKVSP TKLVDGKITV TVPEYAKQAH FVRRALVHWY KRNADKKIRE KVDRYQSVVG VDTAIVRIKD FKSRWGSCTP YGDLEFNWLI VLAPNRIVDY VVVHELCHLL HHDHSPQFWK EVERVMPDYR ECKEWLRDNA QLLVV
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