Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3778 |
Symbol | |
ID | 4479988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4538243 |
End bp | 4539106 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639728391 |
Product | hypothetical protein |
Protein accession | YP_871402 |
Protein GI | 117922210 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAAA GCATGACAGC CTACGCTCGC ATCGAGCACA AAGCACAATG GGGCACCGCC TCTTGGGAAA TTCGCTCAGT CAACCAGCGT TACCTCGAAA CTTACCTACG TCTGCCAGAA CAGTTCCGCA GCTTCGAACC CGTACTGCGC GACCGTCTGC GTAAACGTTT AAGCCGCGGT AAAGTCGAGG TCAATTTACG CTATGAGTTA GCCGACAACA GCAATAACGA ACTCAAATTA AACCAAGGGT TAGCCAAGCA GTTGCTCGAC GCCGCCAGCT GGTTAAAACA AGAAGCCGGC CAAGGCGAAG TGAGCCTGAC TGACATTTTG CGCTGGCCAG GCGTGCTCTC AAGCTCAGAG CAAGATATGG ATGCCATTGG CGCCGAGCTA TTAACGGCTT TCGATTTAGC AATAGACCAG TTTATCGAAG CCCGTGGCCG TGAAGGTGCA GCGATTAAAG AAATGTTGTT AAGCCGTTTA GAAGGCGTCG AAGAACAAAT CGCTATCGTG CGCGAACACA TGCCTAAAGT GATGGAATAT CAACGCGATA AACTCACCAA TCGCCTCGCT GAAATCAAAG GCGAACTCGA CCCCGCCCGC ATCGAGCAGG AGATGATCCT GTTAGCACAA AAACAAGATG TGGCCGAAGA GATGGATAGA CTCGAAGCCC ATGTCACCGA AGCGCGCCGC ATCCTCAAAA AAGGCGGCAG CGAAGGCCGT CGCTTAGATT TTATGATGCA GGAATTTAAC CGCGAATCTA ACACCCTCGC CTCAAAATCC ATCAGCACAG AAATCACCGC CGCCGCCGTC GAGCTCAAAG TACTCATCGA ACAAATGCGC GAGCAGATCC AGAATGTGGA ATGA
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Protein sequence | MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLSRG KVEVNLRYEL ADNSNNELKL NQGLAKQLLD AASWLKQEAG QGEVSLTDIL RWPGVLSSSE QDMDAIGAEL LTAFDLAIDQ FIEARGREGA AIKEMLLSRL EGVEEQIAIV REHMPKVMEY QRDKLTNRLA EIKGELDPAR IEQEMILLAQ KQDVAEEMDR LEAHVTEARR ILKKGGSEGR RLDFMMQEFN RESNTLASKS ISTEITAAAV ELKVLIEQMR EQIQNVE
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