Gene Shewana3_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3778 
Symbol 
ID4479988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4538243 
End bp4539106 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID639728391 
Producthypothetical protein 
Protein accessionYP_871402 
Protein GI117922210 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAA GCATGACAGC CTACGCTCGC ATCGAGCACA AAGCACAATG GGGCACCGCC 
TCTTGGGAAA TTCGCTCAGT CAACCAGCGT TACCTCGAAA CTTACCTACG TCTGCCAGAA
CAGTTCCGCA GCTTCGAACC CGTACTGCGC GACCGTCTGC GTAAACGTTT AAGCCGCGGT
AAAGTCGAGG TCAATTTACG CTATGAGTTA GCCGACAACA GCAATAACGA ACTCAAATTA
AACCAAGGGT TAGCCAAGCA GTTGCTCGAC GCCGCCAGCT GGTTAAAACA AGAAGCCGGC
CAAGGCGAAG TGAGCCTGAC TGACATTTTG CGCTGGCCAG GCGTGCTCTC AAGCTCAGAG
CAAGATATGG ATGCCATTGG CGCCGAGCTA TTAACGGCTT TCGATTTAGC AATAGACCAG
TTTATCGAAG CCCGTGGCCG TGAAGGTGCA GCGATTAAAG AAATGTTGTT AAGCCGTTTA
GAAGGCGTCG AAGAACAAAT CGCTATCGTG CGCGAACACA TGCCTAAAGT GATGGAATAT
CAACGCGATA AACTCACCAA TCGCCTCGCT GAAATCAAAG GCGAACTCGA CCCCGCCCGC
ATCGAGCAGG AGATGATCCT GTTAGCACAA AAACAAGATG TGGCCGAAGA GATGGATAGA
CTCGAAGCCC ATGTCACCGA AGCGCGCCGC ATCCTCAAAA AAGGCGGCAG CGAAGGCCGT
CGCTTAGATT TTATGATGCA GGAATTTAAC CGCGAATCTA ACACCCTCGC CTCAAAATCC
ATCAGCACAG AAATCACCGC CGCCGCCGTC GAGCTCAAAG TACTCATCGA ACAAATGCGC
GAGCAGATCC AGAATGTGGA ATGA
 
Protein sequence
MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLSRG 
KVEVNLRYEL ADNSNNELKL NQGLAKQLLD AASWLKQEAG QGEVSLTDIL RWPGVLSSSE
QDMDAIGAEL LTAFDLAIDQ FIEARGREGA AIKEMLLSRL EGVEEQIAIV REHMPKVMEY
QRDKLTNRLA EIKGELDPAR IEQEMILLAQ KQDVAEEMDR LEAHVTEARR ILKKGGSEGR
RLDFMMQEFN RESNTLASKS ISTEITAAAV ELKVLIEQMR EQIQNVE