| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3777 |
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| Symbol | rph |
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| ID | 4479987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4537315 |
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| End bp | 4538028 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728390 |
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| Product | ribonuclease PH |
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| Protein accession | YP_871401 |
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| Protein GI | 117922209 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAA GTAACAGAAC GCCAGCACAA ACACGTCCCA TCACTATCAC TCGCCAGTTT
ACGGCCCACG CCGAAGGTTC TGTGTTAGTG GAGTTTGGCG AAACCAAAGT ACTTTGTACC
GCCAGTTTTA CTGAGGGTGT GCCACGTTTC CTAAAAGGTC AGGGACAAGG CTGGGTGACG
GCAGAATACG GTATGTTGCC ACGTTCAACC CACAGCCGTA TGGACCGTGA AGCGGCTCGC
GGCAAGCAAT CAGGCCGTAC GCAAGAGATC CAGCGTCTGA TTGGCCGTGC ACTGCGTGCT
TGCGTCGATA TGAAAGCCCT TGGCGAAAAC ACGATCGTTA TCGATTGTGA TGTGATCCAA
GCCGATGGCG GTACTCGCAC TGCGTCTATC ACAGGTGCCT GTGTGGCTTT AGTGGATGCG
CTGAACTGGG CGCGTGGTAA GGGCATTATC AAGTCTAACC CACTGAAGTT TTTGATTGCT
GCGGTCAGCG TTGGTATCTA TAACGGTGAA GCGATCAGCG ATCTCGAATA TGTGGAAGAC
AGCGCGGCTG AAACCGATAT GAACGTAGTC ATGACGGAAA CCGGTAAGAT CATTGAAATT
CAAGGTACGG CCGAAGGTGA GCCGTTTAGC CATGAAGAAT TGATTGAACT ACTCGGGTTG
GCGAAGAACA GTATTCGTGA AATCGTCGAT GTGCAGAAAG CCGCATTAAA TTAA
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| Protein sequence | MRPSNRTPAQ TRPITITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA CVDMKALGEN TIVIDCDVIQ
ADGGTRTASI TGACVALVDA LNWARGKGII KSNPLKFLIA AVSVGIYNGE AISDLEYVED
SAAETDMNVV MTETGKIIEI QGTAEGEPFS HEELIELLGL AKNSIREIVD VQKAALN
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