Gene Shewana3_3757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3757 
Symbol 
ID4479967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4514896 
End bp4516245 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content50% 
IMG OID639728370 
Productaromatic hydrocarbon degradation membrane protein 
Protein accessionYP_871381 
Protein GI117922189 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0902024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC GTCTTCTGAC TTTGGCTGTG ACTGCGGCCT TATTAAGCAC AACGACTCAA 
GTCCAAGCAG CGGGTTTCCA ACTGGCTGAA TACTCAGCGA CTGGCTTAGG CCGCGCCTTC
GCCGGTGAAG CCGCGATTGC CGATAACGCT TCAGTACAAG GCCGCAACCC AGCGATGCTG
ACCTATTTAG AAGGTCGTCA GCTGTCTGCT GGTGGTATCT ATGTGATGCC TAACGTGGAT
GTTAAAGGTG ATGTGAGCTT AAGCTCTCCA TTACTGGGCC CAAATCCCGT TGAAATGAAA
GGCGGCGATG CCTTAGATGT GGCCGATGAT GCATTAGTGC CTAACTTCTA TTATTCCAAC
CAGTTAAACG ACCAATGGAC TTGGGGTCTG GCGGTTAACT CAAACTATGG TCTGTCAACC
GAGTTACCTA AAACCCACGC CGCGGCGATT TTCGGTAATA AAACTGCGGT GACCACTGTT
GAGTTTAACC CTAACATCGC TTACCGCGTA AATGATGCTG TCAGCGTCGG TGGTGGTGTA
CGTATCGTTT ACGGTGAAGG TGAAATCGGT GCCTCGTTAC CGGGTTGGGT CGATCGCATT
AAGCCCGCAT TACCAGCACA AGTGTCTGCC ATGCTACCGC CGGGTGGTAC TGAGCTGAAA
AGCATGAAAG GCGACGACAT TGGCTACGGC TGGCAATTAG GCACGAGCTG GCAGATTAAT
CCTGCACACC GTGTCGGTCT GGCCTATCAC AGCGGCGTAA AGCTTGATTT AGAAGGTCAT
GCATCAGGTG TGATTTACGA TGGCGGCCAG AATCTGTCAA TTGAAGGTTA CATTCCGCTC
GAACTGCCTG CATTTGCCGA GCTGTCCTCC TATCACCAAT TAACGGATAA CTGGGCAATG
CACGCCAGCG TTAACTGGAC CGATTGGAGC GTATTCGATC AGTTAGTGGC TTACTTCCCT
GGTGAAGTTA AGCCAAAGGG TGACTTAGAG TCTGACTTAG TCAAAGAAGA GCACTTTGAA
GATAACTGGC GCTTTGCCTT AGGTACCACC TATCAAGTCA GCAATGAATG GTTAGTACGC
GCGGGTGTGG CCTTAGATAA AACGGCGGCC ACTAATGAAT GGCGTACTAC GACTATCCCT
GACTCTGACC GTCTGTGGTT CTCTGTTGGT GCGGGCTATC AGGCAACTAA AAACCTGAAT
GTTGATTTTG CACTGACCTA TATCCGTGCC ACAGGTGATG CGCCAATCAA CGAACAGCAA
AATCTGCTTA ACCTTGCTAC AGTGAGTTTC AACGGTGAAG CGAGTGGTGA TGTTTGGTTA
GCCGGTATCC AAATGAGCTA CAAGATGTAA
 
Protein sequence
MQKRLLTLAV TAALLSTTTQ VQAAGFQLAE YSATGLGRAF AGEAAIADNA SVQGRNPAML 
TYLEGRQLSA GGIYVMPNVD VKGDVSLSSP LLGPNPVEMK GGDALDVADD ALVPNFYYSN
QLNDQWTWGL AVNSNYGLST ELPKTHAAAI FGNKTAVTTV EFNPNIAYRV NDAVSVGGGV
RIVYGEGEIG ASLPGWVDRI KPALPAQVSA MLPPGGTELK SMKGDDIGYG WQLGTSWQIN
PAHRVGLAYH SGVKLDLEGH ASGVIYDGGQ NLSIEGYIPL ELPAFAELSS YHQLTDNWAM
HASVNWTDWS VFDQLVAYFP GEVKPKGDLE SDLVKEEHFE DNWRFALGTT YQVSNEWLVR
AGVALDKTAA TNEWRTTTIP DSDRLWFSVG AGYQATKNLN VDFALTYIRA TGDAPINEQQ
NLLNLATVSF NGEASGDVWL AGIQMSYKM