Gene Shewana3_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3742 
SymbolmurC 
ID4479952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4497895 
End bp4499361 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content53% 
IMG OID639728355 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_871366 
Protein GI117922174 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.37645e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAAGA CAGAAAGATA CTTACAGCTA AGAAGTATGA TCCCAGAAAT GCGCCGGATT 
AAGCGTATTC ATTTCGTCGG CATTGGCGGC GCGGGCATGG GCGGGATCGC TGAAGTATTA
GTAAACGAAG GTTATGTCGT CAGTGGTTCA GACATCGCGC AAAACGCCGT GACTGACAGA
CTCTGCCTGC TGGGCGCGAA AATTCATATC GGCCATGGCG CCGATAACGT GCAGCAAGCC
GATGTGGTGG TAGTCTCAAC CGCGATTAAT CCTGAGAACC CAGAGATTAT TGCGGCGAAG
GAATTGCGTA TTCCTATCGT GCGCCGCGCC GAGATGTTGG CCGAGTTGAT GCGTTATCGC
CATGGTGTGG CGATTGCAGG GACTCACGGT AAAACCACGA CCACCAGTTT GATTGCCAGT
TTGTATGGTC AAGCGGGGCG CGATCCCACC TTCGTGATTG GTGGCCTGCT GAACAGTGCT
GGTACTAATG CCCGCTTAGG CACGAGTCGT TATCTTATCG CCGAAGCCGA CGAGAGTGAT
GCCAGCTTCC TGCACCTGCA ACCTATGGTC AGCGTGGTGA CGAATATTGA AGCCGACCAC
ATGGACACCT ACGGTGGGGA TTTTGAAAAG CTCAAATCGA CCTTCGTGGA CTTTTTACAT
AACCTGCCAT TCTATGGCGT GGCTGTAGTG TGTATCGACG ATGCAGTGGT GCGTGAGATT
ATGCCGCGCA TTGGTCGCCA TATGATCACC TATGGCTTCA GTGACGATGC CGACGTGCAG
GCACTGAACT TCCATCAGCA GGGTCACCAA TGCCGCTTTA CCGTCAGACG TAAAGGCAAG
GAAGATTTAG ATCTGCTGCT TAACCTACCG GGTCAGCACA ATGTATTAAA TGCGCTCGCG
GCGATTGCGG TGGCGACAGA AGATGAAATC GATGATAGCG CCATCATTCA AGCCTTGGCT
GAATTCCAGG GTATTGGCCG TCGTTTCCAA CACTTAGGTA AGTTCGCGAC GCCAAAGGGC
GAAGTGATGT TAGTGGACGA CTATGGTCAT CACCCCAGCG AAGTGGCGGC GACCATTAAA
GCGGCGCGCG CAGGCTGGCC AGACAAACGC TTAGTCATGG CCTATCAGCC ACACAGATAC
ACTCGTACCC GTGATTTGTA CGAAGACTTT ATTGAAGTGT TATCTCAAGT GGATTGCTTG
TTGTTACTCG AGGTGTATAG CGCGGGTGAA GCGCCGATCC CCGGTGCCGA TGGCCGTGCA
CTGTGCCGCT CGATTCGTTT GCGTGGCCAG TTAGATCCCA TCTTTATCGC CAGCCCAGAT
CAGTTAGCCG AAGTGCTACC CGATGTGTTG CAGGAGGGGG ATTTATTGTT GACCCAAGGT
GCGGGTAATA TAGGCGCCCT GTCGCGCCAG CTAGCCGCCT CTGAATTGGG CTTTAGCATT
GCCGCGACAA CCGAGGTAAA ACCTTGA
 
Protein sequence
MTKTERYLQL RSMIPEMRRI KRIHFVGIGG AGMGGIAEVL VNEGYVVSGS DIAQNAVTDR 
LCLLGAKIHI GHGADNVQQA DVVVVSTAIN PENPEIIAAK ELRIPIVRRA EMLAELMRYR
HGVAIAGTHG KTTTTSLIAS LYGQAGRDPT FVIGGLLNSA GTNARLGTSR YLIAEADESD
ASFLHLQPMV SVVTNIEADH MDTYGGDFEK LKSTFVDFLH NLPFYGVAVV CIDDAVVREI
MPRIGRHMIT YGFSDDADVQ ALNFHQQGHQ CRFTVRRKGK EDLDLLLNLP GQHNVLNALA
AIAVATEDEI DDSAIIQALA EFQGIGRRFQ HLGKFATPKG EVMLVDDYGH HPSEVAATIK
AARAGWPDKR LVMAYQPHRY TRTRDLYEDF IEVLSQVDCL LLLEVYSAGE APIPGADGRA
LCRSIRLRGQ LDPIFIASPD QLAEVLPDVL QEGDLLLTQG AGNIGALSRQ LAASELGFSI
AATTEVKP