Gene Shewana3_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3741 
Symbol 
ID4479951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4496994 
End bp4497743 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content48% 
IMG OID639728354 
Productpolypeptide-transport-associated domain-containing protein 
Protein accessionYP_871365 
Protein GI117922173 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000228967 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACGGG TTAATTGGTA CCTGTGGAGC GGAATTGGTT TTTTATGGTT AGTCATTGGG 
AGTTTTGTCT TTGGTGGCTA CCAACTGCAT AAGTTTTTAA ATGATGCCAG CACGCTGCCC
ATTGAGGCTG TGGCCATCAA AGGTGAACGG ACTTACACCA CAGATAGAGA TATACAAATT
GCACTACAGG ATTTAATGCA GCGGAGTTTT TTCAGCGCAG ACATCACCTT AGTGCAACAG
GCCTTAGAAG CCTTACCTTG GGTGTATCGC GCGTCAGTGA GGCGTGAATG GCCAGCGAAA
CTCAGGGTGT ATTTACAGGA GCAACAACCG GTCGCCCATT GGAATGGCAC CGCTTGGCTC
AATGTGCATG GTGAAGTGTT TGAAGCGCCA TCGCATCCTG AGCTAGAGCA TCTGCCTTAT
TTATCTGGGC CAGATGATAT GGGGACCGAA GTGTTAACCG CCTACGCGCA GGTTAACTCG
TTACTGAAGA TTAATGGCTT TACCTTGGCC AATTTGAGTT TAACGCCACG TCATGCGTGG
CACGCGACAC TGGGTAACGG TATTGTTTTA GACCTAGGTC GAGAAGATAA AATGGCAAGG
ATACAAAGGT TTATCACTGT TTATCCGTTA CTGGCGAAAC AAGATAAACC GATTGCCAGA
GTGGATTTGC GCTACGACAC AGGGTTGGCC GTAGGCTGGG GCGATGCACA AACAAGAGAG
CCGATAATTA ATGACCAAAA ACCAAGATAG
 
Protein sequence
MSRVNWYLWS GIGFLWLVIG SFVFGGYQLH KFLNDASTLP IEAVAIKGER TYTTDRDIQI 
ALQDLMQRSF FSADITLVQQ ALEALPWVYR ASVRREWPAK LRVYLQEQQP VAHWNGTAWL
NVHGEVFEAP SHPELEHLPY LSGPDDMGTE VLTAYAQVNS LLKINGFTLA NLSLTPRHAW
HATLGNGIVL DLGREDKMAR IQRFITVYPL LAKQDKPIAR VDLRYDTGLA VGWGDAQTRE
PIINDQKPR