| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3660 |
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| Symbol | |
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| ID | 4476259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4396084 |
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| End bp | 4397844 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728265 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_871285 |
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| Protein GI | 117922093 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCA GATTAAAGAT GCGTTTGGGC GATCTGTTAG TTCAAGAATC GATTATTACC
GAAGAGCAGC TACAACAAGC TTTGGGAGAG CAGCGCAAGA CTGGGCATAA GCTCGGCCGC
ACCCTGATTG AGCTGCGCTC TATTACCGAA ACCCAACTAC TGCAATTTTT GTCGCAGCAG
CTAAATCTGC CACTGCTTGA TATCAGCAAA CGCCCAATCC CCGCTGAAGT GGTAAGCCTT
ATCCCCGAGG TGCAAGCACG GCGTTTTCGT GCCCTTGCGG TGGAAGATCG GGGCGATACG
GTATTAGTGG CTATGAGCGA CCCTGCAGAT TTGCAGGCGC TCGACCATTT AGAAAACTTA
ATTACGCCTA AAAAGCTCAG TGTTGCGGTC GCGCCCGAGC AGCAGTTACT GCAAGCCTTT
GATAACCTGT ATCGTCGTAC TGACCAAATC GCGCAAATTG CCGGTAAGCT CGAAGAGGAA
TATGCCGCAG ATCAAATGTT TGATCTGGCG AGCCTGACCT CAAGCGATAG CGATAATGAA
ACCACAGTCG TTAAGCTGCT GCAGTCGATT TTTGAAGATG CGGTGCAAAT GCGCGCCTCG
GATATTCATA TTGAGCCCGG CGAAAAAGCC CTGCGGATCC GCCAACGTAT CGATGGTCAG
TTACACGAGA CCATTCTAAA CGAAGTCAAT ATCGCGGCGG CCTTAGTCTT GCGTCTTAAG
CTTATGGCTG GGCTAGATAT TTCTGAAAAA CGTCTGCCGC AGGACGGGCG TTTCCATATG
GAAATTAAGG GCCACAAGAT TGACGTGCGT ATGTCGACTA TGCCGATTTA CCACGGCGAA
TCTGTGGTAA TGCGTCTACT CGACCAATCC GCAGGCTTGC TGACCTTAAA TGAGACAGGG
ATGCCGCCGC ATATTTTGGC GCGTATCCGT AAGCAAATTA AACGTCCCCA CGGCATGTTG
CTGGTGACTG GACCAACGGG TAGCGGTAAA ACCACCACCT TGTATGGCAT CTTAAGTGAG
CTCAATACTG CGGATCGCAA AATCATCACG GTAGAAGATC CGGTCGAATA TCAATTGCCA
AGGATCAACC AAGTTCAAGT TAACCATAAG ATTGGGCTCG ATTTTTCGAA CGTGCTGCGC
ACTACTTTGC GTCAAGACCC GGACATTATC ATGGTCGGTG AGATGCGTGA CCAAGAAACG
GTGGAGATTG GTCTTAGGGG CGCACTAACG GGTCACTTTG TGTTATCCAC ATTGCACACT
AACGATGCGG TAACCAGCGC GCTGCGTTTA CTCGATATGG GCGCCGCCAG TTACTTAGTG
GCTAGTGCGC TAAGGGTGAT TATCGCCCAG CGTTTAGTGC GCCGCGTGTG CCATAACTGC
GGGGTGGAAT ACCAGCCTAC GGCGCAGGAA AAAGCCTGGC TGAATAGCGT GAGTCGTCAG
GACTTTTCAT CGGCTAAGTT CCGCATTGGC ACTGGCTGCC AAAGCTGTAA CGGCAGTGGT
TATCGCGGCC GTATCGGTAT TTTTGAGATC CTCGAGTTGG ATGAAAAGAT GATCGATGCG
ATGCGTACCG GTAATCCACA GGATTTTGCC CGTGCAGCCC TGCAAAGCCC GAATTTTACT
CCGCTTGCCG AGTCAGCACT GCAATATTTG AGCGAGGGCA TGACGACGAT TGAAGAGGTG
GCTAAGCTAG TTGAGGATGT GAGTGAATCG CAGGTGCCAC TCTCACGGGA TATTATCAGT
CAGCAAGGCG TTGAGGCGTA A
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| Protein sequence | MKPRLKMRLG DLLVQESIIT EEQLQQALGE QRKTGHKLGR TLIELRSITE TQLLQFLSQQ
LNLPLLDISK RPIPAEVVSL IPEVQARRFR ALAVEDRGDT VLVAMSDPAD LQALDHLENL
ITPKKLSVAV APEQQLLQAF DNLYRRTDQI AQIAGKLEEE YAADQMFDLA SLTSSDSDNE
TTVVKLLQSI FEDAVQMRAS DIHIEPGEKA LRIRQRIDGQ LHETILNEVN IAAALVLRLK
LMAGLDISEK RLPQDGRFHM EIKGHKIDVR MSTMPIYHGE SVVMRLLDQS AGLLTLNETG
MPPHILARIR KQIKRPHGML LVTGPTGSGK TTTLYGILSE LNTADRKIIT VEDPVEYQLP
RINQVQVNHK IGLDFSNVLR TTLRQDPDII MVGEMRDQET VEIGLRGALT GHFVLSTLHT
NDAVTSALRL LDMGAASYLV ASALRVIIAQ RLVRRVCHNC GVEYQPTAQE KAWLNSVSRQ
DFSSAKFRIG TGCQSCNGSG YRGRIGIFEI LELDEKMIDA MRTGNPQDFA RAALQSPNFT
PLAESALQYL SEGMTTIEEV AKLVEDVSES QVPLSRDIIS QQGVEA
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