Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3657 |
Symbol | |
ID | 4476256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4393632 |
End bp | 4394249 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639728262 |
Product | methylation site containing protein |
Protein accession | YP_871282 |
Protein GI | 117922090 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000205665 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTA AACAAAATGG TTTTTCATTG ATTGAACTGG TCATTGTGAT CGTAATTTTG GGTCTGTTGG CCGCAACCGC GATCCCTCGT TTTTTAAATG TCACCGATGA TGCTGAAGAT GCCAGTGTGG ACGGTGTGGC GGGTGGTTTA TCCACCGCAG TGAGTTTTGT GCGTTCACAA TGGGAAGTCG ATGGTCGCCA AAATAGCAGT GTGATCTTAG ACGGTACCTC AGTGTCCCTC GACCCGCGTT TTGGTTATCC AACGGGCACC TCTGGTACCG ATGCAACGGC GATGACCGAT GCAAGCTGTC AGCAGGTATT TAATACTGTG TTGCAAAGTG CACCGCGTAA CGTGCTTTAT TCGCAAGATG CGCGCAATCA ACGTTATACA GTGCGCGTTA TCGATGGTGC GGGCGGAAGC TCAAATGCGA TTAATGGCAC GTCCGTAAGC GGTTTAGATT TATGTGTGTA TCACCAAGTG GCTTCACTGG TGCTAAACCA AACCACTGGT GTACCGACTC CTGCGCCAGA TTTATCGACT ACGGGCGCTA AAGGGGTGGT GTATAACCCA GGTACGGGTA AAGTATTAAG TTTCACTCAA ACACCATTTA CGCCTTAA
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Protein sequence | MKTKQNGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAED ASVDGVAGGL STAVSFVRSQ WEVDGRQNSS VILDGTSVSL DPRFGYPTGT SGTDATAMTD ASCQQVFNTV LQSAPRNVLY SQDARNQRYT VRVIDGAGGS SNAINGTSVS GLDLCVYHQV ASLVLNQTTG VPTPAPDLST TGAKGVVYNP GTGKVLSFTQ TPFTP
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