| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3642 |
|---|
| Symbol | |
|---|
| ID | 4476241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 4374222 |
|---|
| End bp | 4375016 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639728248 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_871268 |
|---|
| Protein GI | 117922076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTATCG AATCGCAGCT TGAAGAATTA ACCCGTGAGC GCCTGCAATG GGATAAAGAT
GCCCCGCATT TAGTGGTGCT GCCAGAATGC AGTCTGCTGT TTGGTGGCCA TGAGAGTCAA
CAACTCGCCT ATGCGGGCGA CAGTCATCTT AGCCCGTTAA AATCCGCCTT AAGTGCCTTA
GCCGCCCGTT ACTGCGTGTA TATGGTGGCG GGAACCATCC CCGCGCTGGC GGAGGATGGA
CGTGTCTACA GCCGTTGTTA TCTGTTTGAT GATAAAGGTG ATACCTTAGG GCAATACGAT
AAACTGCATC TGTTTGACGT GGATGTCGCC GACGGCACTA AGCAATACCG CGAGAGTGAA
ACCTTTTGCC CCGGCAATCA TATAAGCGTC ATCGACACCC CTTTTGGCAA AATTGGCTTG
ACCATCTGTT ATGATTTACG CTTTCCGGAT TTATTCAGGG CGCTACGCCT CGCGGGAGCC
GAGGTTATTA CCGTGCCTTC GGCCTTTACT AAGGTCACCG GAGAAGCCCA TTGGCAGGTG
TTATTACAGG CCAGAGCCAT TGAAACCCAA TGCTTTATTT TGGCCGCCGC CCAATGGGGC
GCCCATAACG AAGGCAGTCG CGAGACCTGG GGACAGAGCA TGGTGATAAG CCCTTGGGGC
GAGGTGATTG CCGAGCAGAA AACCGGTATA GGTTGGGTGC ATGCCGATAT CGATGTGGCC
GAGGTGCACA GCATCCGCAG TAAAATGCCC GTGGCGCAAC ATAATCGCTT TACTGCACCG
AACCTTAAGC CTTGA
|
|---|
| Protein sequence | MFIESQLEEL TRERLQWDKD APHLVVLPEC SLLFGGHESQ QLAYAGDSHL SPLKSALSAL
AARYCVYMVA GTIPALAEDG RVYSRCYLFD DKGDTLGQYD KLHLFDVDVA DGTKQYRESE
TFCPGNHISV IDTPFGKIGL TICYDLRFPD LFRALRLAGA EVITVPSAFT KVTGEAHWQV
LLQARAIETQ CFILAAAQWG AHNEGSRETW GQSMVISPWG EVIAEQKTGI GWVHADIDVA
EVHSIRSKMP VAQHNRFTAP NLKP
|
|---|
| |