| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3627 |
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| Symbol | rimO |
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| ID | 4476226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4354424 |
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| End bp | 4355866 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728233 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_871253 |
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| Protein GI | 117922061 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG AAACTTTTAA TCCTAAGCAA ACAACCACGC TTGAGACCCC AGCCAAGACA
TTAGAAGCAG CGAGTGCTGA CTTAGCTAAT GCCGAAAGTG CTACCGGGAA TCGCATCGGT
TTCGTGTCTT TGGGTTGCCC AAAAAACCTA GTGGACTCAG AGCGCATTCT GACCCAATTA
CGCATCGACG GCTATGAAGT CACCAACAGC TACGATAATG CCGATCTGGT TATCGTCAAC
ACCTGTGGCT TTATCGATGC GGCGGTTGAA GAATCCTTAG ATGCGGTGCG CGAAGCCCTA
GAAGAAAACG GCAAAGTGAT CGTGACTGGC TGTTTAGGCG CCAAGGAAAA CCAAATTCGT
GAAGTGCACC CAGACGTGCT CGAAATCACC GGCCCACACA GCTACGAAGC CGTGTTAAAG
CATGTACACA AGTACGTGCC AAAACCAGAG CACAACCCAT TTACCTCGTT AATCCCACAA
ACTGGGGTTA AGTTAACGCC TAAGCATTAC GCTTACTTAA AGATTTCAGA AGGTTGTGAT
AACCGTTGTA CCTTCTGCAT CATCCCAGCA CTGCGTGGCG ATTTAGATAG CCGTCCAGCC
GGTAGCGTAT TAGATGAAGC CAAGCGTTTG GTTGAATCAG GCGTGCAAGA AATTTTAGTC
GTAAGCCAAG ACACCTCTGC CTACGGCAAA GACAAGGGCG GCCGCACCGA TTTCTGGAAC
GGTATGCCGG TGAAGCAAGA CATCACTAGC CTTGCCCGCC AACTGGGCAA GATGGGCGCT
TGGGTACGTT TACACTACAT CTACCCATAC CCATGGGTTG ACGATCTGAT CCCATTAATG
GCCGAAGGCT TAATCCTGCC TTACTTAGAC ATTCCAATGC AGCACGCCAG CCCTCGCATC
CTGAAAATGA TGAAGCGTCC AGGCCGTGTT GACCGTCAGT TAGAAGCGAT TCAACGCTGG
CGCGAAATCT GCCCAGACTT GGTGATCCGC TCAACCTTTA TCGTGGGCTT CCCTGGCGAA
ACCGAAGAAG ACTTCGAAAT GTTGCTCGAC TTCCTGCGTG AAGCGCGCCT CGACCGCGTA
GGCTGCTTCA AGTACTCAGA AGTGGAAGGC GCAGTCGCCA ACACCATCGC TGAACTTATC
AGCGAAGACG TGAAGGAAGA CAGATACCAC AGATTTATGG AAGTCCAAGC CGAGATCAGC
GCCGAGCGTT TAGCCCGTTT CGTTGGCCGC ACTATGGATA TTCTGATCGA TGACGTAGAC
GAAGAAGGCG CCATTGGCCG CAGCTTCGCC GATGCCCCAG AAATCGACGG CATGGTCTTT
ATCAACGGTG AAACCGAACT CGAACCCGGC ATGTTAGTCC GCGCTGTGAT CACTCACTCG
GACGAGCACG ATCTGTGGGC TGAGTTAGTC GACGCCGATG CAGAAGATGA TATCGAGGCT
TAA
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| Protein sequence | MTVETFNPKQ TTTLETPAKT LEAASADLAN AESATGNRIG FVSLGCPKNL VDSERILTQL
RIDGYEVTNS YDNADLVIVN TCGFIDAAVE ESLDAVREAL EENGKVIVTG CLGAKENQIR
EVHPDVLEIT GPHSYEAVLK HVHKYVPKPE HNPFTSLIPQ TGVKLTPKHY AYLKISEGCD
NRCTFCIIPA LRGDLDSRPA GSVLDEAKRL VESGVQEILV VSQDTSAYGK DKGGRTDFWN
GMPVKQDITS LARQLGKMGA WVRLHYIYPY PWVDDLIPLM AEGLILPYLD IPMQHASPRI
LKMMKRPGRV DRQLEAIQRW REICPDLVIR STFIVGFPGE TEEDFEMLLD FLREARLDRV
GCFKYSEVEG AVANTIAELI SEDVKEDRYH RFMEVQAEIS AERLARFVGR TMDILIDDVD
EEGAIGRSFA DAPEIDGMVF INGETELEPG MLVRAVITHS DEHDLWAELV DADAEDDIEA
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