Gene Shewana3_3574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3574 
Symbol 
ID4476174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4288151 
End bp4288771 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID639728182 
ProductFxsA cytoplasmic membrane protein 
Protein accessionYP_871202 
Protein GI117922010 
COG category[R] General function prediction only 
COG ID[COG3030] Protein affecting phage T7 exclusion by the F plasmid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.965876 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTAA TCCTGTTTTT ATTATTTGTG CTGATCCCAG TTGTCGAACT GTCAGTGTTA 
ATCCGCGTGG GCGAAGTGCT CGGCACTTGG ACCACCATTG GTCTGGTATT ATTCACCGCC
GTATTGGGTG TGTCCCTCGT GCGTAGCCAA GGGCTGAGCA CGCTGATGCA AGTACAGCAA
AAACTCACGC GAGGTGAGGC GCCTGGGCAG GAAATTGTCG AAGGCATGAT GTTAGCCATG
GCGGGGGTAT TGCTGGTTAT TCCAGGCTTT GTGACTGATT TTATTGGCCT ATTATTACTC
ACACCCTTAA CGCGCCGCCC GATTGCCGCC TTAGTGTTTA AGCGTATGCA GCTGCGGGTG
GTATCCGGTT TACAGGGTGG TATGCACGGC GGTTTTGGTG CAGGCCCATT TGGTCCGCAT
TCTGGCTCGC AATCGAATCC ATTTGGGCAG AATCCCTTCG AGCAACATAC GCACTCCGAC
GGCAATGTGT ACGAAGGGGA CTTTGAGCAT AAGGCTGATC CGAGCGATAA ACGCCCCGAG
AGTCATCAAT TAACGGAGAA AGACTGTGAC GCGAAAGTGC ATGAGCCTAA CGACACTCAG
CCCAAAGATC CAAAATCTTA A
 
Protein sequence
MFLILFLLFV LIPVVELSVL IRVGEVLGTW TTIGLVLFTA VLGVSLVRSQ GLSTLMQVQQ 
KLTRGEAPGQ EIVEGMMLAM AGVLLVIPGF VTDFIGLLLL TPLTRRPIAA LVFKRMQLRV
VSGLQGGMHG GFGAGPFGPH SGSQSNPFGQ NPFEQHTHSD GNVYEGDFEH KADPSDKRPE
SHQLTEKDCD AKVHEPNDTQ PKDPKS