| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3569 |
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| Symbol | |
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| ID | 4476169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 4280766 |
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| End bp | 4282124 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728177 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_871197 |
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| Protein GI | 117922005 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0796958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0492062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA GACACGGGCT GCTTAGCGCG CCAATTGGTC GTGTACTGCT CAACATGAGC
CTCCCCAACT TGATTGGCAT TATGACCATT CTAGGTTTTA GCCTCGCTGA CACTTTTTTT
ATCAGTCAGT TAGGGACCGA AGCCTTAGCG GCGATCAGTT TTACCTTTCC GGTGACTTTG
ATTATTTCCA GCATCGCCAT TGGGATTGGT GCCGGCGTTT CCACTAACCT TGGCAGGCTG
ATAGGCTCGG GCAATGCCCC ACGCGCCAAG GTGTTTCTGC ACGATGCGCT GCTGCTAACC
TTTATCCTTA TCGCCAGCTT ATCCGCCCTA GGTAGCATTT TTATTAAGCC GCTCTTTAGT
TTGCTTGGCG CCAATGACAC CAGCTTGCCG CTGATCCACG ACTATATGAT GTATTGGTAT
GTGGGCGCGC CGCTGTTGGT GCTATTGATG GTGGGTAATC AAGGCCTGCG CTCGACTGGG
GATACTCGCT CCCCTGCGAT GATTATGGCG CTGGCGGCGA TCATTAACTT AATACTCGAT
CCCTTATTAA TCTTCGGCAT TGGGCCCTTC CCACGCTTGG AGATCCAAGG CGCGGCGATT
GCAACCCTGT TCTCTTGGCT GATAGCCCTG TCGCTCTCGG GTTATTTGTT GATTATTAAG
CGCAATATGT TGGAATGGGC GGCATTTGAT ATCGATAGAA TGCGCGCCAA CTGGAGTAAA
CTCGCCCATA TCGCCCAGCC CGCAGCTCTG ATGAATTTAA TCAACCCACT CGCCAATGCG
GTGATTATGG CGATGCTGGC GCATATCGAC CACAGTGCCG TCGCGGCCTT TGGTGCGGGC
ACCCGTTTAG AATCTGTGCT CTTGATTGTG GTGATGGCGC TCTCGTCGAG CCTGATGCCG
TTTATCGCGC AAAACCTCGG GGCAGGCCAA ACTCAAAGGG CGAAACAGGC GTTGCTGTTA
TCGCTTAAAT TTATCTTTGT ATTCCAAACC TTACTCTATA TTCCGCTGGC ATTTTTCGCC
CAGCCACTTG CCCATTTATT CAGTACCGAT CCGCAGGTGC TAGAGTGGTT AAGTTTTTAT
ATTCTGGTCT TGCCCTGCGC CTACGGCCCG CTCGGCATAG TGATCATCTT TGCCACGGCA
CTGAATGCGT ACCACAGACC CATGAGCTCG TTAGTGATTA ACCTGTGCCG CTTAGTGCTG
CTGATGCTGC CGTTGGCGGC GCTGGGGTCT TATATCGATG GGGTGAAAGG CTTGTTGCTC
GCGCTCCCCA TCACCAACCT CTTGATGGGG ATTGCTTGTT ATTATCTGGC GCAGCGCATT
TGCGAACCCG CTAAGGTGAC GACCGCCGAC GCTATTTAA
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| Protein sequence | MKDRHGLLSA PIGRVLLNMS LPNLIGIMTI LGFSLADTFF ISQLGTEALA AISFTFPVTL
IISSIAIGIG AGVSTNLGRL IGSGNAPRAK VFLHDALLLT FILIASLSAL GSIFIKPLFS
LLGANDTSLP LIHDYMMYWY VGAPLLVLLM VGNQGLRSTG DTRSPAMIMA LAAIINLILD
PLLIFGIGPF PRLEIQGAAI ATLFSWLIAL SLSGYLLIIK RNMLEWAAFD IDRMRANWSK
LAHIAQPAAL MNLINPLANA VIMAMLAHID HSAVAAFGAG TRLESVLLIV VMALSSSLMP
FIAQNLGAGQ TQRAKQALLL SLKFIFVFQT LLYIPLAFFA QPLAHLFSTD PQVLEWLSFY
ILVLPCAYGP LGIVIIFATA LNAYHRPMSS LVINLCRLVL LMLPLAALGS YIDGVKGLLL
ALPITNLLMG IACYYLAQRI CEPAKVTTAD AI
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