Gene Shewana3_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3540 
Symbol 
ID4476140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4239789 
End bp4241285 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content50% 
IMG OID639728149 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_871169 
Protein GI117921977 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTA AACGGATCGC TGCAGCTATC TCCTGCAGTT TAATGACGGT TGTAGCCCAC 
GCTGCAGTCT TACCCGCAAC TCAAACTGAC AGTCAGTGGT TTAAAGACAG TGCAGCCAAT
GTTGCGGCTA AAGCGCAGGT TGAAACCAAG AAAATAGCTA AAAACGTGAT TCTTTTTGTC
GGCGACGGCA TGAGTATTTC AACCTTAACT GCCGCCCGTA TTCTGCAAGG ACAGCAGCAA
ACGGGTAATC AAGGCGGTGA AGAAAACTTC TTAAGTTTCG AGCAGTTTCC TCACACGGCG
TTAGTGAAAA CCTACAACAC TAACCAACAA ACGCCTGACT CCGCAGGTAC CATGACCGCC
ATGGCGACTG GGGTAAAAAC CAAAGCCGGT ATTATCTCGA TTTCTGACAC CAGTTTACGT
GGTAACTGTT TGTCTTCTAA AGGTAATGAA CTCGTTTCTC TGGTTGACCT TGCCAATGCT
AAAGGCTTAT CGACTGGGAT TGTCACGACC GCCCGTTTAA CTCACGCGAC TCCAGCCGCG
ACTTACGCTA AATCGCCAGA ACGCGATTGG GAAGGCGATT TTAACCTGCC TGCCGAAGCC
GTTGCGAATG GCTGTACCGA TATCGCCAGC CAATTGGTGA TGCGCGATGA GGCTAACTCA
CTTAGCGTTG CTCTGGGTGG CGGTCGCAGC TACTTCTTGC CAAAAGAAGT CACTGACGGT
GAGAACAAAG CCGGTAAACG TAAAGACGGC AAAGACCTGA CTAAAGCGTG GGTCGAAAAC
TTCAGCAAAG CGGCTTACGT GTGGGACAAA AAAGGCTTCG ATGCTATCGA TGCCGCCAAT
ACCGATCACT TACTTGGTCT CTTTAACCCA TCCCATATGG AATACGAAGC AGACCGCGCC
GATGACGTTG GTGGTGAGCC ATCACTTTCA GAAATGACCG CGAAATCCCT CGAGATTTTA
AAGAAAAACG ATAAGGGCTT CCTGCTGATC GTGGAATCGG GTCGTATCGA CCATGGACAC
CATGCGGGCA ACGCTAGCCG CGCCTTGACC GATGCGGTTG AGTTATCTAA CGCCGTGAAA
GCCGCAGTGG ATGCAACCAG CAGCGATGAT ACCCTCATCA TGGTAACCGC TGACCACAGC
CATGTATTTA CCATTGCAGG CTACCCAAAA CGCGGTAACC CGATTTTAGG TTTAGTCCAC
GATGTGGATG GTTCGTTAGC CCTCGCTAAC GACGGCAAGC CTTACACTAC GCTGGCCTAC
ACTAACGGCC CAGGCGCTGT GGTTGGCGTG CGTGACGACT TAACCTCAGT CGATACTCAA
GATAAAGACT TCATGCAACA AGCACTTATC CCAATGGAAA GTGAGACACA CGCCGGTGAA
GACATCAGCT TACACGCAAT GGGCCCAGGT TCGAATCTGG TACAGGGCGT GATTGAGCAG
AACGTGATCT TCCACATTAT CAACCAAGCC CAGCAGCTTG GCGGCACAAA GTACTAA
 
Protein sequence
MNIKRIAAAI SCSLMTVVAH AAVLPATQTD SQWFKDSAAN VAAKAQVETK KIAKNVILFV 
GDGMSISTLT AARILQGQQQ TGNQGGEENF LSFEQFPHTA LVKTYNTNQQ TPDSAGTMTA
MATGVKTKAG IISISDTSLR GNCLSSKGNE LVSLVDLANA KGLSTGIVTT ARLTHATPAA
TYAKSPERDW EGDFNLPAEA VANGCTDIAS QLVMRDEANS LSVALGGGRS YFLPKEVTDG
ENKAGKRKDG KDLTKAWVEN FSKAAYVWDK KGFDAIDAAN TDHLLGLFNP SHMEYEADRA
DDVGGEPSLS EMTAKSLEIL KKNDKGFLLI VESGRIDHGH HAGNASRALT DAVELSNAVK
AAVDATSSDD TLIMVTADHS HVFTIAGYPK RGNPILGLVH DVDGSLALAN DGKPYTTLAY
TNGPGAVVGV RDDLTSVDTQ DKDFMQQALI PMESETHAGE DISLHAMGPG SNLVQGVIEQ
NVIFHIINQA QQLGGTKY