Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3512 |
Symbol | |
ID | 4479296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 4212053 |
End bp | 4212955 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639728121 |
Product | transcriptional regulator |
Protein accession | YP_871141 |
Protein GI | 117921949 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATAAAA TCGCCGCCAT GCGCAGCTTT ATCGAAGTGG CCAACTGTGG CAGCTTTACT AAGGCCGCAG AACACCTCGA TCTCAGTCGC CTACAGGTAT CACGTCATAT TCAAGAAATT GAACAGTGGC TGAGTTTACG TTTATTGCAC CGCACGACCC GCAGCGTCAG CCTCACTCTG CAGGGGGAAG AAGCCCTGCA ATATTGTCAG CGGGTGCTGA GCGAAGTCGC CGCAATGGAA AGCCGCGCCC ATAGTCATAA CACCGAATTA GTTGGCAGTA TTCGCATCGC TACGCCCGTC GGGCTTGGGC AGCACAGTCT GTTTGATGTG GTCGATCGCT TTATAAAATT GCACCCTAAG GTCAATATTC AGCTGTTAAT GTCGGACAGT TTTGCCCAGT TGGTGGATGA GCGGGTGGAC GTGGCACTGC GCTATACCGA GCAGCCCGAT GAGAATTTGA TTGCCCGCAA ACTGATGAGC ATAGATGCCG TGCTGTGCGC CGCGCCCAGT TACTTGGCTC AAGCCGAGCC GCTAACCGTC CCTAACGATC TGCTCAGCCA TAATTGCCTT ATCCATAGCT CGCAGCAACA TTGGCAGCTC CTCAAGGAGC AACAGAGTGA GCTGATTAAA CCTATGGGGA ATCTGATGGC GAATGAAATG GGAGTGCTGG TCAGCGCCGC ATTGCGCGGG CATGGCATTG CCTACTTGCC CTGCGACTTA GCCAATCCCT ATCTGGCCAG CGGCCAACTG CAAGAAGTGC TCCCCGAATA CACGGCGCCA GGGCAAACCC TCTGGGCTGT GTATCTCTCC CGCAGTTATC AACAAGCGCT GGTGCGCGCC TTTATCGATT TTACCGCCCA GCAATGGCAG CAGGATCTCA GCAAGTGGAC GACGGCGAGT TAA
|
Protein sequence | MDKIAAMRSF IEVANCGSFT KAAEHLDLSR LQVSRHIQEI EQWLSLRLLH RTTRSVSLTL QGEEALQYCQ RVLSEVAAME SRAHSHNTEL VGSIRIATPV GLGQHSLFDV VDRFIKLHPK VNIQLLMSDS FAQLVDERVD VALRYTEQPD ENLIARKLMS IDAVLCAAPS YLAQAEPLTV PNDLLSHNCL IHSSQQHWQL LKEQQSELIK PMGNLMANEM GVLVSAALRG HGIAYLPCDL ANPYLASGQL QEVLPEYTAP GQTLWAVYLS RSYQQALVRA FIDFTAQQWQ QDLSKWTTAS
|
| |