| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3485 |
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| Symbol | |
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| ID | 4479269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4178943 |
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| End bp | 4180304 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639728094 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_871114 |
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| Protein GI | 117921922 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAT CAGCTAAAAC CCTGCAACAA CGCATGGGCA TTGTCGCCCT CACTTGGCCG
ATTTTTATCG AAACCTTGCT GCAATCCTTA CTCGGGATCA GCGATATTTT TATGCTGAGC
CATTATTCCG ATAATGCCGT CGCCGCAGTG GGGCTCACCA CCCAATTGAT GTTTTTTATG
ATGGTGATGT CCATGATGGT CAGCACGGGC GCCAGTATTC TGATTAGCCA AAATAATGGT
GCAGGGCAGA CGCAGCAAGC GACCGATATT GGCGTGGCCA GCGTGGCCTT AAGCTTAGGC
TTAGCCGTGG TGATGGGCGC ATCGATGTTT TTCGGTGCCC ACGGCATTAT TAGTTTATTT
GCACTAGAGC CTGAGGTCGC GGGCTATGGT AATGACTATC TGCTGATCTG CGGCAGTTTA
AGCATAGGGC TGGTGATGAA CATCGCCTTT GCCGCCATCT TACGTAGCTA CGGTTTTACC
CGCTCGGCCA TGTTAGTTAC CTCCAGCACG GGATTGATGA ATGTGCTCGG TAACTATATT
GCCCTCTATT CTCCCTTTGG TTTGCCAGTT TATGGGGTGA CTGGGGTGGC GATTTCGACT
GTCACCAGCC AGATTATTGG TGCCTTGATT ATGTTGGCGG TGATCCGCCA TAAAGGTATC
CCACTGCCGA TGCTGCGACT TAAGTTATTG CCGCGCAGCA CCTATTGGAG CGTGATGCGC
ATTGGTTTGC TTAATGCGGG CGAAATGCTG TCCTACAACG TGGCACAGAT GACCATCATC
TATTTTATTA GTCAGATGGG CACACTCTCG CTGACCGCCT ATACCTATGG TTTGAATATT
AGCCGCTTTA TTTACTGTTT TGCGGTGGCG CTCGGGCAGG CGGCGCAAAT TCAAACCGGT
TACTACGTCG GTAAACAATG GTTCGATGAG ATTACTGGAC GGGTGCAAAA GTATTGCTTG
GTGGGCTTTA TTACCTCCCT CGCCATAGTG TTAGTCTTTT ATTGGCAGCG CTTTACCATT
GTGGGCTGGT TGAGTGAAAA CCCAGAGGTC ATTCAACTTA CCGCGCTTTT GCTATTGGGC
TCCATCGCGC TCGAAACTGG CCGAGTCTTT AATCTGGTGA TTATTTCGGC ATTAAAAGGC
GCGGGGGATG TGGCGTTTCC GGTGCGCGTG GGCCTGTTTA GCATGTGGGG AATTGGCGTG
TTATTGGCTT GGTTCTTTGG GCTGCACTTA GGTTATGGCG TACTTGCCGC TTGGCTTGCG
GTTGCGGCCG ATGAATGGGT ACGAGGCTTG ATTATGGTGC ACCGTTGGCG CTCGGGTCGC
TGGCAGCGTT TTACCCGTAT TCCGCCAGCA ACGCCTATTT AA
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| Protein sequence | MAKSAKTLQQ RMGIVALTWP IFIETLLQSL LGISDIFMLS HYSDNAVAAV GLTTQLMFFM
MVMSMMVSTG ASILISQNNG AGQTQQATDI GVASVALSLG LAVVMGASMF FGAHGIISLF
ALEPEVAGYG NDYLLICGSL SIGLVMNIAF AAILRSYGFT RSAMLVTSST GLMNVLGNYI
ALYSPFGLPV YGVTGVAIST VTSQIIGALI MLAVIRHKGI PLPMLRLKLL PRSTYWSVMR
IGLLNAGEML SYNVAQMTII YFISQMGTLS LTAYTYGLNI SRFIYCFAVA LGQAAQIQTG
YYVGKQWFDE ITGRVQKYCL VGFITSLAIV LVFYWQRFTI VGWLSENPEV IQLTALLLLG
SIALETGRVF NLVIISALKG AGDVAFPVRV GLFSMWGIGV LLAWFFGLHL GYGVLAAWLA
VAADEWVRGL IMVHRWRSGR WQRFTRIPPA TPI
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