| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3466 |
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| Symbol | |
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| ID | 4476809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4156829 |
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| End bp | 4157707 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639728075 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_871095 |
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| Protein GI | 117921903 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCCC CGCTATGCTG TGTTCAAGGC ATGGGTAAAG ACTGTGACTG GATTTTAAAG
CATCGGGAGA CAAGCAATAT GGCGGTTGAA CACTCAAGCT TAAAGGGCAA GGTAGGGCTA
ATCACCGGCT CCACCAGTGG AATTGGTTTA GCAACGGCGC ATGTGCTGGC GGAGCAAGGT
TGTCATCTGA TCCTGCACGG GTTAATGCCA GAGGCCGAGG GGCGGCGCCT CGCTGCGGAG
TTTGCCGAGC AATATCATAT TCACACTTAT TTCAGTAACG CCGATCTGCG GGATCCAGAG
AGCATCCATG CCTTTATGGA CGCAGGCGTT AAGGCGTTGG GCAGTATTGA TATTTTGGTG
AATAATGCCG GTATTCAACA CACTGAAAAT GTTGCTCATT TCCCGATTGA TAAATGGAAC
GACATTATCG CCATTAACCT GTCCTCGGCC TTTCATACCA TTCAACAAGC CGTGCCTGCG
ATGGCCGAAA AGCGTTGGGG CCGCATTATC AATATCGCCT CGGTGCATGG TTTAGTGGCC
TCGGTCAACA AGGCGGCCTA TTGTGCGGCT AAACACGGGA TTGTCGGCTT AACCAAAGTC
GTGGCTATTG AGTGCGCCGA GCAGGGGATT ACCGTCAATG CGATTTGCCC AGGCTGGGTG
GATACGCCGC TGATCAACAA ACAGATTGAG GCTATCGCCA GCAATAAGGG TTTAAGTTAC
GACGAGGCTA AGTACCAGCT CGTCACGGCA AAACAACCCC TGCCAGAGAT GCTAGACCCA
CGTCAGATTG GCGAGTTTGT GCTGTTTTTA TGTAGCAGTG CGGCGCGGGG AATTACGGGC
GCATCGCTGG CAATGGACGG CGCTTGGACC GCGCAATAG
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| Protein sequence | MCAPLCCVQG MGKDCDWILK HRETSNMAVE HSSLKGKVGL ITGSTSGIGL ATAHVLAEQG
CHLILHGLMP EAEGRRLAAE FAEQYHIHTY FSNADLRDPE SIHAFMDAGV KALGSIDILV
NNAGIQHTEN VAHFPIDKWN DIIAINLSSA FHTIQQAVPA MAEKRWGRII NIASVHGLVA
SVNKAAYCAA KHGIVGLTKV VAIECAEQGI TVNAICPGWV DTPLINKQIE AIASNKGLSY
DEAKYQLVTA KQPLPEMLDP RQIGEFVLFL CSSAARGITG ASLAMDGAWT AQ
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