| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3460 |
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| Symbol | |
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| ID | 4476803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4146997 |
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| End bp | 4150524 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728069 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_871089 |
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| Protein GI | 117921897 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.549126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGAATA TCTTGCTGGC GTGGTTGTCT GTTGATACTT GGTGGATCAG CGTTATATCG
ATTGCCTATT TGGCTGTGCT GTTTATTGTC GCCCAATGGG GGCAAAATCA GGCGATAGAT
CAATGGCGTA AACGGCCTTG GGTGTACAGT TTATCCTTGG GGGTGTGTTG TACTTCTTGG
GCGTTTTACG GCACGGTTGG GCAAGCGGCG ACCACGGGCG CTTGGTTAGC GCCCATCTAC
ATAGGTTCGA TAATCTGCCT AGTGCTGGCG TGGCCTATGT TGATGCGCAC ATTGCAGATC
ATCAAAAGCC AAAACCTGAC CTCGATTGCT GACTTTATCG CCTGCCGCTT CGACCGCTCG
CCTAAAATTG CCGCCAGCGT TGCCATGGTG TCCCTCTTTG GCACTATTCC CTATATCGCG
CTGCAACTGA GGGCGATAAG CACCAGCTTC GACCTCTTAA CTGGTACTTT TCAATCTGGG
ATCAGCACGG CGTTTATCGT TACTATCGTG TTGATTATCT TTAGTATCTT ATTCGGTACT
CGGCAGCTTT CGGCCAGTAA ACAAAACCAA GGCTTGGTAT TAGCGATTGC CTTTAGCTCA
ATTGTAAAGC TGTTTGCGCT CACCACGGTT GGGTTGTTCG CGACTTTCTA TGTGTTTGAT
GGTTTTAGTG ATTTGCTCGC TCGAGGTCAA CATTTACCGC CGAGTTCTGA GGGGAATTCA
CTCTATTTTG TGCTGTCACA AATTCTGCTT GGCGCCATTA CCATCTATGC GCTGCCACAG
GAATTCCACA TGATGATGAT TGAAAATCAT CATGCCAAAG AGTTAAAAGC CGCCCGTTGG
ATGGTGCCAC TCTATCTGCT GCTGATTAAT GCCTTTGTGT TACCTATCGC ACTTGCGGGG
CAGATTAGCT TCCCCGGCGG CAGTGTCGAT GCCGACACCT ACGTGCTAAC CTTACCACTC
TTCTATCAGC AAGCTTGGCT TGGGATCTTG GTGTATATTG GCGGCCTTGC GGCGGCAACG
GCCATGGTCA TTGTGGCGGC GATTGTACTG AGCACCATGA TTTCGACCGA GATTTTAACT
CCATTGCTGC TGAGATTACC GAAATTTAGC TCGCAGCAGA CGCCGCAGCT TGCGGGGATA
TTGCTCAATT TACGGCGGAT ATCGATAGCG GCGATTCTGC TATCGGCCTT TGCCTTCGAG
CGTTATATCG ATCAGCAGAA TCACTTGGCC AGTATTGGCT TATTATCCTT TGTGCTGTTG
TCGCAGTTTT TTCCCGCCGC CGTGGGCGCG CTCTATTGGC GCCGCGCTAC CACCCAAGGT
GCCTTTTGGG GCATGTTGAT GGGCAGTTTA GTCTGGCTCT ATACCTTGCT GCTGCCCGCG
ACCTTTCCCG ATGCACTCTG GGTCACCCAA GGCTTGTTGA ATATTCCATG GTTAACTCCA
ACCGCGCTAT TTGGCCTGAC GGGGCTGGAT AATATCAGCC ACGGCCTACT GTATAGTTTG
CTCGCGAACG TCGGTTGTTT TGTGCTGATT TCGTTGCTGA AAGAGCAGAG TGTGGGGGAA
GTGCTTCAAG CCGATGTGTT TGTTAACCGC AAACAGGTGG CGCTGGAAAG GCACCTCTCG
GTTGAGGATC TGGCGAGCCT ACTACACCGC TTTATCAATA AGGAAGAAGC CGATGCCCTG
CAGGCTAGGG CGAAAGTACT TGGTTCGGAA TTGCAATTAG CCACACGGCG CGAGGAGCTG
GTGGATTACA CCCGCCTTAA GCTGTCGGGA GTGCTAGGGT CTGCCTCGAC GCGGATGGTG
ATGAATGCCG CCTCACGCTC CCAGCAAGTG CCGCTGGAGG ATGTGGTCAG CATAGTCGAT
GAGGCCAACC AGATCTTCGA GTTTAACCGC GAGCTGCTGC AATCAGGGGT CGAAAACATC
GAGCAGGGGA TCAGCGTAGT CGATGCCGAT ATGCGCCTAG TTGCATGGAA CAAACGCTAT
ATTGAATTGC TTGATTATCC TAAAGATTAC GTCAAAGCAG GCATACCGAT AGAGACGCTG
CTGAGGTTTA ATATCGAGCG CGGCATTATT GTGGGCGATG AGGCCCATGA GCTGGTTGAA
AAACGCCTCG CCCATATGCG TAGCGGCAGC CCACACCATT TCCAGCGCAC TATGCTCGAT
GGCAAGGTAC TGGAGATCCG TGGTCAAGCC ATGCCGGGTG GCGGCTTTGT CAGTACCTTT
ACCGACATTA CCGCCCATAT TCAGGCCGAA AAAGCCCTGC AACTGGCTAA CGAAACCCTC
GAAAAGCGGG TCGAAAGCCG CACAAGGGAA CTCGCGAAAG CCAAGGCCGA AGCCGAGGCG
GCCAATAGCA GTAAGACACG TTTTTTAGCG GCGGCGAGCC ACGATTTAAT GCAGCCCTTT
AACGCGCTCA CCCTGTTTAC CGAGATGCTC AAACAGCGGG TGACGTCGAC CGAACTCAAG
GATCTTGCCA CCCATATTGA AGCCTCCTTA AATGTGGTGG AGAGCCTGTT ATCCGATCTG
GTGGAAATCT CCCGCCTCGA TAGCAGCAGC CTTAAAACCG AGCAGAGCCA GTTTGCGCTC
AATGATTTAC TCTCAACCTT AGTGAATGAG TTTAAAGTGC TTTCTGCCGA GCAGGGCATC
GATTTTTCCT ATCAGCTTTC CTCCTGTCTA GTGCAAAGCG ACCAACGTTT GCTGCGACGG
ATTATTCAAA ACTTCCTCTC CAATGCGTTC CATTATTCCC CGGCTGGCGC GGTGAATCGG
CAAACGCCGC TGTCGCTCAA TGCCAGCGCG GCTCTGCCTA AGCTATCACA AGCCGATTTT
GTGCCTAAGG TGTTGCTGGG TGTGAGGCGA CTCGAACACA GCCTGCTCAT TCAAGTGTGG
GACAATGGCC CGGGCATTCC TCAAGATAAA CAGCAGGCGA TTTTCGGCGA GTTTGAGCGC
CTCGAACAAA CGCGGGAGAT CCCAGGGCTT GGGCTGGGAC TGGCGATTTG CGATCGCATC
GCTAAGTTAC TCGGGCTTAA GATTGCGTTG CACTCAGAGG TGGGTAAGGG CACCTGTTTT
AGCGTTGAAG TGCCGCGCGT ATTCGCCCAG GCTAAACCCA GTAATCCCAG TAATGTGGTT
AAGCTACGCA GCGAAGAGGA AGGCGCAAAC GATAGCTTTA ATATCAGCGT GTTAGTCATA
GATAACGATG AGTTAATGCT AAAGGCCATC TCCTCATTAC TGTTAGGCTG GGGCTGCCAT
GTACTCACTG CACGGGATAA AGCCAGTGCC GAGCAGCAAC TGACGCAGCA GGTGTTGCCG
AAGCTTATCA TTGCCGATTA CCACTTGGAT GATGACCAAA ACGGTGTCGA TCTGGTGCAA
AGCTTGCTCA CCCATCCTGT GTTTAGCAGT CAGCGTCCGA CCTGCATTAT CTGCTCGGCA
GATCCGTCTG AATCCGTGCG ACAACATACC AGCAGTGCAC AGTTCAGTTT TGTGCGTAAA
CCCGTTAAAG CCACCGCCTT AAAACGATTG ATTAAGCAAT TGTCTTAA
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| Protein sequence | MGNILLAWLS VDTWWISVIS IAYLAVLFIV AQWGQNQAID QWRKRPWVYS LSLGVCCTSW
AFYGTVGQAA TTGAWLAPIY IGSIICLVLA WPMLMRTLQI IKSQNLTSIA DFIACRFDRS
PKIAASVAMV SLFGTIPYIA LQLRAISTSF DLLTGTFQSG ISTAFIVTIV LIIFSILFGT
RQLSASKQNQ GLVLAIAFSS IVKLFALTTV GLFATFYVFD GFSDLLARGQ HLPPSSEGNS
LYFVLSQILL GAITIYALPQ EFHMMMIENH HAKELKAARW MVPLYLLLIN AFVLPIALAG
QISFPGGSVD ADTYVLTLPL FYQQAWLGIL VYIGGLAAAT AMVIVAAIVL STMISTEILT
PLLLRLPKFS SQQTPQLAGI LLNLRRISIA AILLSAFAFE RYIDQQNHLA SIGLLSFVLL
SQFFPAAVGA LYWRRATTQG AFWGMLMGSL VWLYTLLLPA TFPDALWVTQ GLLNIPWLTP
TALFGLTGLD NISHGLLYSL LANVGCFVLI SLLKEQSVGE VLQADVFVNR KQVALERHLS
VEDLASLLHR FINKEEADAL QARAKVLGSE LQLATRREEL VDYTRLKLSG VLGSASTRMV
MNAASRSQQV PLEDVVSIVD EANQIFEFNR ELLQSGVENI EQGISVVDAD MRLVAWNKRY
IELLDYPKDY VKAGIPIETL LRFNIERGII VGDEAHELVE KRLAHMRSGS PHHFQRTMLD
GKVLEIRGQA MPGGGFVSTF TDITAHIQAE KALQLANETL EKRVESRTRE LAKAKAEAEA
ANSSKTRFLA AASHDLMQPF NALTLFTEML KQRVTSTELK DLATHIEASL NVVESLLSDL
VEISRLDSSS LKTEQSQFAL NDLLSTLVNE FKVLSAEQGI DFSYQLSSCL VQSDQRLLRR
IIQNFLSNAF HYSPAGAVNR QTPLSLNASA ALPKLSQADF VPKVLLGVRR LEHSLLIQVW
DNGPGIPQDK QQAIFGEFER LEQTREIPGL GLGLAICDRI AKLLGLKIAL HSEVGKGTCF
SVEVPRVFAQ AKPSNPSNVV KLRSEEEGAN DSFNISVLVI DNDELMLKAI SSLLLGWGCH
VLTARDKASA EQQLTQQVLP KLIIADYHLD DDQNGVDLVQ SLLTHPVFSS QRPTCIICSA
DPSESVRQHT SSAQFSFVRK PVKATALKRL IKQLS
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