| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3455 |
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| Symbol | |
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| ID | 4476798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4139162 |
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| End bp | 4141132 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639728064 |
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| Product | ABC transporter related |
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| Protein accession | YP_871084 |
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| Protein GI | 117921892 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.016844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0104011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAAGC CATTACTGGA AGTGTCAGCT TGCTACCGCA GTTTTCAGGC GGGTGAGCAA
CAACTGACTG TACTCAAAGA TATTAATCTT TCCATCGCCC GTGGTGAGAT GGTGGCGATT
GTCGGCGCCT CGGGTTCGGG TAAGTCGACC CTGATGAATA TCTTGGGCTG TTTAGATAAA
CCCTCAAAGG GCTCGTACTT TATCGATGGC CAAGATACCT CGCAGATGGA TGTGGATGAA
TTGGCAAAGC TGAGGCGCGA GCATTTTGGC TTTATTTTCC AGCGATATCA TTTGCTTGGC
GATCTCAATG CCGTGGGTAA CGTCGAAGTG CCCGCCGTGT ATGCGGGGAA AGATCGTCTC
GAGCGTCGGG AGCGGGCGGA AAGCTTGTTA TCGCGTTTGG GTTTAGGTGA GCGCCTAGAC
CATAAGCCGA ATCAGCTCAG TGGCGGCCAG CAGCAAAGGG TGAGTGTGGC GCGGGCGCTG
ATGAATGGCG GCGATGTGAT CCTCGCCGAC GAACCGACGG GCGCCTTAGA TAGTCACAGC
GGCGAAGAAA TGATGCGGCT GTTGCAGGAG CTGCACCGCG AGGGCCAGAC CATCATTATC
GTGACCCACG ATATGCATGT GGCCCAGCAT GCCGACCGCA TTATCGAGAT TAAGGACGGG
GTGATTATCA GCGATGAGCC TAATCCCGCC TCCAATATTG CTGCTGCGCC TAAGACCGAA
GTGATCCCCG CCAAGACTAA GGCACGCGCC CGCGTGGCGG CATGGGACAG ATATGCCGAA
GCCCTGAAAA TGGCGCTGCT GGCGATGTCG ACCCATAGAT TGCGCACCTT TTTAACTATG
CTCGGGATTA TTATCGGTAT CGCCTCCGTG GTGTCTGTGG TGGCGCTGGG TGAAGGCTCG
CAGCGGGAAA TCTTAAAGAG CATTAGTTCG ATGGGCACCA ATACCATAGA CATTCGCCCC
GGCTCAGGCT TTGGTGATAG GCGCTCGGCA AGGGTGCGAA CTTTGACCGC AAGCGATGCT
AATGCACTGA AAAACTTGCC CTATGTCGAT AGTGTCACCC CGAGCATTGG CTCGAGTGCG
ACTGTGCGTT ATGGCAATAA GGCGGTCACG GCGACGGTGA ATGGCGTAGG GCCTGAGTTC
TTCCGCGTTC GAGGCTATGA GCTTGCCCAA GGACAGTTTT GGGACGATGA CAGTGTTAAT
GCGTTAGCCC AAGATGCGGT GATCGACGAG AACACCCGTA AACAGCTGTT CCCTAACAGT
AGTGGCGCTA TGAATTCTGC CATCGGGGAA GTGATCTTCC TCGGGGATTT GCCGGTGCGG
ATTATTGGCG TCACTCAGCC TAAGGAAAGC GCCTTTGGTA ATAGTGATGC CCTCAATGTG
TGGGTGCCTT ACACGACGGT TTCTGGCCGT ATGGTAGGTA AAAAATACTT AGATGGCATT
ACCGTGCGAC TCGATGAGTC GGTGCCGAGC AATGCGGCGG AGCAGGGCAT TATTAGCCTG
CTGAAGATGC GCCACGGCAC CCAGGATTTC TTCACCATTA ACACGGATAC CATTCGCCAG
AATATCGAGA AAACTACCGC GACCATGACG CTATTAATCT CGGCGATTGC GGTGATTTCA
CTCGTAGTGG GTGGCATTGG GGTGATGAAT ATCATGCTAG TGTCGGTGAC CGAGCGCACC
CGCGAGATTG GGGTTCGCAT GGCGGTCGGG GCGCGCCAGA GCGATATTCT GCGGCAGTTT
TTAATTGAGG CCGTGTTGGT TTGTCTGTGC GGCGGCGCGC TTGGGGTGGC CTTGGCCTAT
CTGATTGGCG TGGTGTTTGC CCAAGCGGGA GGCAGTTTCC AGATGATTTA TTCGACGACT
TCTATTGTTG CCGCCTTCGC CTGCTCTACC TTAATCGGGG TGTTGTTTGG CTTCCTGCCC
GCTCGTAATG CGGCGCGTTT AGACCCTGTT GATGCCCTAG CGAGAGAGTA A
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| Protein sequence | MSKPLLEVSA CYRSFQAGEQ QLTVLKDINL SIARGEMVAI VGASGSGKST LMNILGCLDK
PSKGSYFIDG QDTSQMDVDE LAKLRREHFG FIFQRYHLLG DLNAVGNVEV PAVYAGKDRL
ERRERAESLL SRLGLGERLD HKPNQLSGGQ QQRVSVARAL MNGGDVILAD EPTGALDSHS
GEEMMRLLQE LHREGQTIII VTHDMHVAQH ADRIIEIKDG VIISDEPNPA SNIAAAPKTE
VIPAKTKARA RVAAWDRYAE ALKMALLAMS THRLRTFLTM LGIIIGIASV VSVVALGEGS
QREILKSISS MGTNTIDIRP GSGFGDRRSA RVRTLTASDA NALKNLPYVD SVTPSIGSSA
TVRYGNKAVT ATVNGVGPEF FRVRGYELAQ GQFWDDDSVN ALAQDAVIDE NTRKQLFPNS
SGAMNSAIGE VIFLGDLPVR IIGVTQPKES AFGNSDALNV WVPYTTVSGR MVGKKYLDGI
TVRLDESVPS NAAEQGIISL LKMRHGTQDF FTINTDTIRQ NIEKTTATMT LLISAIAVIS
LVVGGIGVMN IMLVSVTERT REIGVRMAVG ARQSDILRQF LIEAVLVCLC GGALGVALAY
LIGVVFAQAG GSFQMIYSTT SIVAAFACST LIGVLFGFLP ARNAARLDPV DALARE
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