Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3440 |
Symbol | |
ID | 4476783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4122443 |
End bp | 4123240 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639728049 |
Product | penicillin-binding protein, transpeptidase |
Protein accession | YP_871069 |
Protein GI | 117921877 |
COG category | [V] Defense mechanisms |
COG ID | [COG2602] Beta-lactamase class D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0522212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.234091 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCGT TAGCCTTATC GGCTGTGTTG CTGGTGACAA CGATGATTGG CATGCCTGCG GTGGCAAAGG AGTGGCAAGA GAACAAGAGC TGGAATGCTC ACTTTAGCGA ACATAAAACC CAAGGCGTGG TTGTGCTGTG GAACGAGAAT ACACAGCAGG GTTTTACTAA CGATCTTAAA CGGGCAAACC AAGCATTTTT ACCTGCATCG ACCTTTAAGA TCCCAAACAG TTTAATTGCC TTGGACTTAG GTGTGGTTAA GGATGAGCAT CAAGTCTTTA AATGGGATGG ACAGACGCGA GATATCGCCG CATGGAATCG CGACCATGAT TTAATCACCG CGATGAAGTA TTCGGTTGTG CCTGTTTATC AAGAATTTGC CCGCCAAATT GGCGAGGCTC GTATGAGTAA AATGCTGCAC GCCTTCGATT ATGGCAATGA GGATATCTCG GGCAATTTAG ACAGCTTTTG GCTCGATGGT GGTATTCGAA TTTCGGCTAC CCAGCAAATC GCTTTTTTAC GCAAGCTGTA CCACAACAAG CTGCACGTTT CTGAGCGTAG TCAGCGCATC GTCAAGCAAG CCATGCTGAC CGAGGCAAAT GCCGATTATA TTATCCGAGC GAAAACTGGT TACTCGACGC GAATTGAGCC GAAAATTGGT TGGTGGGTTG GCTGGGTCGA ACTCGATGAC AATGTGTGGT TCTTCGCGAC CAATATGGAT ATGCCTTCCG CTGAGGGCCT AGGGTTACGT CAAAGCATTA CGAAAACAGT GCTGAAACAG GAAAAAATTA TTCCTTAG
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Protein sequence | MRALALSAVL LVTTMIGMPA VAKEWQENKS WNAHFSEHKT QGVVVLWNEN TQQGFTNDLK RANQAFLPAS TFKIPNSLIA LDLGVVKDEH QVFKWDGQTR DIAAWNRDHD LITAMKYSVV PVYQEFARQI GEARMSKMLH AFDYGNEDIS GNLDSFWLDG GIRISATQQI AFLRKLYHNK LHVSERSQRI VKQAMLTEAN ADYIIRAKTG YSTRIEPKIG WWVGWVELDD NVWFFATNMD MPSAEGLGLR QSITKTVLKQ EKIIP
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