| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3438 |
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| Symbol | |
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| ID | 4476781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4116555 |
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| End bp | 4121108 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728047 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_871067 |
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| Protein GI | 117921875 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.394712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.936037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA ATAATCAGCC CACACACATG ACTCAAGCCC AAACGCCCGA TCCGCTTTTT
TTACAAGCCG AGCATTTGGC AAAAGATTTT TCTCTGTTTC CTAAACACAG TAAACAGAGC
TTATCAGATG AAATTAAAGG TCTTTTAAAC GATGACGCCA TTCAGGCAAA TTTAAAAGAC
TTGGCATCGT TAGATGTCGA TGGTTACGTC GCAAAAGTGA TCCAGCCGAC CCAAGATAAA
GGTCGTCCTG GTGCAAAACG TATCATTGCT GACCTAAAGG GTCGCTTGAT TACCGAAACT
CACTTGGGTT CTTTCTACAG CGCTGAGGTC GAGCTGAATT TCGGTTCACG CACTCGTCGT
ATCGGTTTTA TTGCCCAAGA GCGTACTACG GCTAACGGCG CGTGGATGCC TGAGCATCAC
TATGCGGCCT GTAAAGCAAT TCGTCATTTC GCCGAATTGT CTATGCCTAT CGTTTACCTC
ATCGACACCC CAGGGGCCGA TGCGGGCGAA GTGGCTAACA GCCAAAACCA AGCCCATTCT
ATTTCTAAGG CGATTGCTGA GAGTGCCAAC GTTGACGTGC CAACTGTCGG TATCGTTATC
GGTGCGGGTT ACTCGGGCGG CGCGATTCCA TTAGCGGCGG CCAACATCCT GTTATCGCTG
CGCGATGGTA TTTTCAACAC GATTCAGCCA CAAGGTCTGC AGAGTATTGC GCGTAAGTAC
AACCTGTCAT GGCAGGAATG TGCTAAGTCT GTGGGCGTGT CTCCAGAAGA GCTTTACACC
GCGGGTTGTA TCGATGGCAT CATCGATTTC TCTCCTGGTG ACCGTGACGA GCGTCAGCAC
AACTTACGCC GCGCTATTAT CAGCAGTATC GAAGCTGTTG AACGTGCAGC CATCAACTTT
GTGCGTGAAT CTAAAGATTT ACGTGAGCAC TATGACCGCA GTTTAGCGCG CTTCCTCAGC
CCATCTAAAA ACCTGATGGC GTTAGAGTTA AACGCAGAAT TGGCCGTGGC AACTAGCCCA
ACCAACCACC ACAACCTGTT TGGTAGTGCT TACCGTTACC TGCGTTATTT AACGCTGCGT
AGCCGCATTC ATTCAATCTC TCAGGAGCAA TACGGACGTC TGTCACGTGT TAGCGTGCCT
GAAGGTGACT TGTTAGCACG TATCCAGCAA GAGCAAGACC GTGTATTCCA AGCTTGGTTA
TCAAGCCCTG ATAAGCTGGT TTACGATGAA GATCTAAACA AGCTGTGGGC GAACTTTATT
GCTAAGCGTG ATGAAGTGTC TACCGAGCGT AACATGCTGA CGCGTTTGAT TTTGGGTGAA
CCAAAAGAAA ACTACAAAAA AGCACGTAAG GCGCTGTTAT TTAACATCGG TTGGTCTTTA
TATCACCGTT GGAAGAGCAA CGCGGCAAAC AACTTCAAGG GCTTAATCCA GCACCTTGAA
AATCTGCCAA AGTCAGTCAC TCAAGCCAAG TGGCCTGAAC TGAATCAACT GACTGTGCTC
GATGTGGTTG TGAACGACGA ACTGCGTGAA GACTTCATTT GGCAATGTCA TAACATCCTG
ATCTTTAACT CACTGTACGA CAACGTTGTG GGCAGCTTAG CGTCTATCGC GAAAGAAGCC
ATGATGGCGA AGAGCCTGTC TCGTAACTCA GTGAACAACC TGCTGCACAA GTCAATTGAC
CATGCGCTGT CGACTCAGGA TACCGCTAAC GACAAGGCGA AATTCTACAA GTGGCTTAAG
TACTTTATGG GCCAGTCTAA CCGTGCTGAC TTATTGGTGC GTGTTGAGCA GTGGAAGAGT
GTGGGCTTCC CACAACTTAA CGACAGTTTA TTCGTTATCC TGACTTACTT CTTCGAGCGT
TTACTGCCTG AATACTTCGA CAGTGAAAGC GATAACAGCA AGTACACTGG CGCGATTAAC
CCTGTGCGTA TTGGTCGTCG TAAGGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAC
TTACTGATCC AAAAAGTATT ACGTGACGAA AAACGTACCG GCAAGATGAC CTGGGAAAAT
GTGATTAAGC AATTCTTCAC TCATTTTGAA GAGATCAATG GCGACAAGAT GTCAGCCAAC
TTGCTTAACT TCCCTGGTTT CCGTCTCTCA ATCGAAGATG CGTTAGACAA AGGCATTCGT
CCTTGCGGTC TGATCACTGG TATTGCTGAC TTTAAAGAAA AAGGTCAAAA AGTCCGTGTG
GGTGTGGCTG TGTCTAACAC CGCATTCCAA GCGGGTGCCT TCGATATGGC GAGTGCTGAG
AAATTCTCTG CGCTGCTGAT CGAGTGTGCT AAGCGTAAGC TACCTGTTGT TTGCTTTATC
AGCTCAGGCG GTATGCAAAC TAAAGAAGGT GCTGCAGCAC TGTTCTCAAT GGCTGTTGTG
AATGACCGGA TCACTCGTTT TATCCGTGAT AACGAATTGC CAGTACTGAT GTTTGGTTTT
GGTGACTGTA CCGGTGGTGC GCAGGCGAGT TTCGTGACTC ACCCATTAGT GCAAACCTAT
TACCTGTCTG GTACTAACAT GCCATTCGCG GGTCAAATGG TGGTTCCAGC TTACTTGCCT
TCGACTTCGA CACTGTCTAA CTACTTGTCG AAAGTACCTG GTGCAATGGC GGGCTTAGTC
CACAACCCAT TCAGCGAAAC CTTAGATAAC CAATTGGCGA GTATCGATCC TCTGATGCCA
ATGCCAACGG CGAAGATCAG TGATGTGATC ATCAACGCCC TATCAACACT GGTTGTTGAA
GCGCCTGTTG AAGAAGAAGT GATTGTTCAA AACGATCCAC GTAAGTTAAT GAAACCAATT
AACAAAGTAT TGGTTCATGC CCGTGGTTGT ACCGCTGTTA AGTTGATCCG TAAGGCTCAC
GATAACGATA TCAACGTGGT ATTAGTGGCG TCAGATCCTG ACATGACCGC CGTACCTGCG
GATATGCTGA AAGACTCAGA CAAGTTAGTC TGCTTAGGTG GTAACACCTC TGACGAAAGT
TACCTGAACG CTTACTCAGT GCTCAAAGTT GCCGAATATG AGCAAGTTGA TGCACTGCAC
CCAGGTATCG GCTTCCTGTC TGAAAGTCCA CAATTTGCGG CATTGTGTGT GAACAATGGG
GTTAACTTCG TTGGTCCTAG CGTGCATTCA ATGACGACTA TGGGTAACAA GTCGAACGCG
ATTAAGACGT CACAAAGCCA AAACGTGCCA GTAGTACCAG GTTCGCACGG TATTCTGACG
AACGCTGAGC AAGCGGTGAA CGTGGCCAAC GAAATTGGTT ACCCAGTACT GCTCAAAGCG
GTACAAGGTG GTGGCGGTAA AGGTATCCAG GTCGTTAAAC GTCCTGAGGA TATGATTGGT
TTATTCCAAA AGACCTCTAC CGAAGCGGCT GCGGCTTTTG GTAACGGCGA CTTGTACTTA
GAGAAATATG TAACCTCACT ACGTCATATC GAAGTGCAGT TACTGCGTGA CAAGTTTGGT
AACGCTAAGG TTCTGGGTTT ACGTGACTGT TCTGTACAAC GTAACAACCA GAAAGTGGTC
GAAGAGTCTG GCTCAACCAT GCTGCCAGAA GAACTGAAGA AACAAGTGCT GGATTACACC
CGTGCTTTAG GTGATGCGAC CGATTACATG GGCGCAGGTA CAGTTGAGTT CATCTATAAC
TTAGATGCAA ACGAAGTGTA CTTCATGGAA ATGAACACCC GTCTGCAGGT AGAACATCCA
GTTACTGAAG CGACTTCAGG TATCGATATC GTGAGCGCGC AGTTTGATAT CGCTGCGGGT
CGTTCAATCG AGAACCTGGA GCCAAAAGAA ATCGGTTATG CAATGGAAGT GCGTGTGACT
GCAGAAAAAG CAGCACTGGA CAGCCATGGT GTACTGCAAC TGATCCCAAA TCCTGGCAAG
ATCACCGAAT GTGTATTCCC AGATCATCCA GATGTGGAAA TCATCTCGAT TGCCGCCGCG
GGTAAAGAAG TATCACCATA CTACGACAGC TTAATCGCTC AGGTAATTAT GCGCGGTGAA
AACCGTGAAG ACGTTATCGC GAAACTGCAC GCTTACTTAG ACAGCGTAGT GCTCAAAGGT
ATCGCGACTA ACATTCCATT GCTGAAACTG ATCCTAAGCG ATGGCACCTT CAAAGAAGGC
GTATACGACA CTAACTACCT GCCACGTTTC ATGGCTGAGC TCGACATTCC AGCACTGATC
GCTGAAATGG AAGCCGCTGC CGAAACCGTC GGTGTAGACA CTGAGTCACT GCGTGTGGGT
GAAAGTAACG AACTGAAAGT GTTAGCCCAA GGCGCAGGTA TCTTCTATAC CTCTCCAGCC
CCAGGCGAAC CTGACTTTGT GAAAGAAGGC GATATTGTAA CTGCAGATCA AACGCTTGCG
TTAACTGAAG CGATGAAGAT GTTTTCTCAG GTCAACTTAG CTGGCTTCAA CCGTCAAGGC
GCAGTGTTGT ATCCAGAAGA TAAGAAGTAC CGCATCGAGC GTATTCTGAA CAGCAATGGT
CAGCAAGTAT CGCAAGGTGA CTTGCTCTTC GTTGTGTCGC CAGTTGAAGA TTAA
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| Protein sequence | MTSNNQPTHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LSDEIKGLLN DDAIQANLKD
LASLDVDGYV AKVIQPTQDK GRPGAKRIIA DLKGRLITET HLGSFYSAEV ELNFGSRTRR
IGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIVYL IDTPGADAGE VANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT AGCIDGIIDF SPGDRDERQH NLRRAIISSI EAVERAAINF
VRESKDLREH YDRSLARFLS PSKNLMALEL NAELAVATSP TNHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRVSVP EGDLLARIQQ EQDRVFQAWL SSPDKLVYDE DLNKLWANFI
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNIGWSL YHRWKSNAAN NFKGLIQHLE
NLPKSVTQAK WPELNQLTVL DVVVNDELRE DFIWQCHNIL IFNSLYDNVV GSLASIAKEA
MMAKSLSRNS VNNLLHKSID HALSTQDTAN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSES DNSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRTGKMTWEN VIKQFFTHFE EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMAGLV HNPFSETLDN QLASIDPLMP
MPTAKISDVI INALSTLVVE APVEEEVIVQ NDPRKLMKPI NKVLVHARGC TAVKLIRKAH
DNDINVVLVA SDPDMTAVPA DMLKDSDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQSQNVP VVPGSHGILT
NAEQAVNVAN EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVV EESGSTMLPE ELKKQVLDYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIENLEPKE IGYAMEVRVT AEKAALDSHG VLQLIPNPGK ITECVFPDHP DVEIISIAAA
GKEVSPYYDS LIAQVIMRGE NREDVIAKLH AYLDSVVLKG IATNIPLLKL ILSDGTFKEG
VYDTNYLPRF MAELDIPALI AEMEAAAETV GVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEPDFVKEG DIVTADQTLA LTEAMKMFSQ VNLAGFNRQG AVLYPEDKKY RIERILNSNG
QQVSQGDLLF VVSPVED
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