Gene Shewana3_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3400 
Symbol 
ID4476743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4068804 
End bp4069691 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content51% 
IMG OID639728009 
Productphosphoribulokinase/uridine kinase 
Protein accessionYP_871029 
Protein GI117921837 
COG category[C] Energy production and conversion 
COG ID[COG3954] Phosphoribulokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAA AACATCCGAT TATTGCAGTT ACAGGCTCAT CCGGCGCAGG AACCACCACC 
ACTACTACCG CCTTTAGCCA TATCTTTCGC CAGCTAGGGA TTAATGCCGC CTTTGTAGAA
GGCGACAGTT TTCATCACTT TACCCGTGCA GAGATGGAAG TGATGATACG CAAATCCCAG
GCCGAGAATC GCAATCTGAG TTACTTTGGC CCCGAGGCCA ATAACTTTGC CCGTCTAGAG
CAATGCTTTC GCGATTACGG CGCCACAGGC CAAGGCGAAA CCCGCAGCTA TTTACATACC
TTCGATGAAG CTGTGCCCTT CAACCAAATG CCTGGCACCT TCACCCAATG GCGTCCACTG
CCCGAAAACA CCGATATGTT GTATTACGAA GGCTTACATG GTGGCGTAGT CACAGGCGAT
GCCAACGTTG CCCAGCATGT GGATTTGCTG ATCGGCATGG TGCCTATCGT CAACTTAGAG
TGGATCCAAA AGATCATCCG TGACACCTCG GAGCGAGGTC ATAGCCGCGA AAAAGTCATG
GGCTCAATCG TGCGCAGCAT GGACGATTAC ATTAAGCATA TGACGCCGCA GTTTTCCCGT
ACCCATATCA ACTTCCAACG GGTGCCGACG GTCGATACCT CTAACCCCTT TAGCGCCAAA
GATATTCCAA GCCTAGATGA AAGCTTTGTG GTGATCCGTT TTCGCGGCAT CAACAACGTC
GACTTCCCCT ATTATTTGAG CATGATCCAA GGCTCCTTTA TGTCGCGGGT CAACACCTTA
GTGGTGCCGG GCGGCAAAAT GTCACTCGCT ATGGAGCTGA TCCTCACACC ACTGATTAAA
GATTTAATGG AAAAACGCCA GCAGCTGAAT AGCCCGCAGG CGAACTGA
 
Protein sequence
MSAKHPIIAV TGSSGAGTTT TTTAFSHIFR QLGINAAFVE GDSFHHFTRA EMEVMIRKSQ 
AENRNLSYFG PEANNFARLE QCFRDYGATG QGETRSYLHT FDEAVPFNQM PGTFTQWRPL
PENTDMLYYE GLHGGVVTGD ANVAQHVDLL IGMVPIVNLE WIQKIIRDTS ERGHSREKVM
GSIVRSMDDY IKHMTPQFSR THINFQRVPT VDTSNPFSAK DIPSLDESFV VIRFRGINNV
DFPYYLSMIQ GSFMSRVNTL VVPGGKMSLA MELILTPLIK DLMEKRQQLN SPQAN