| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3384 |
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| Symbol | |
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| ID | 4476727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4055553 |
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| End bp | 4056992 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639727993 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_871013 |
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| Protein GI | 117921821 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCGC GGGTTACCCA CCACAGGATA TTCGCCTTGA GCAATTCAGA CACTCAGCCT
TCAATGGCTT TCTCAACTCT TAAGCTAAAA CCCGAACTGC TTGAGAACCT TACCACTATG
GGCTATCACG AAATGACGCC GATTCAGGCG CAGAGTCTGC CAGCCATTTT AGCGGGCGAG
GATGTGATTG GTCAGGGCAA GACGGGTTCG GGTAAAACGG CGGCCTTCGG TTTAGGTCTG
CTGAACAAGT TAGATGTGAA GCGTTTTCGC ATTCAAACCT TAGTGCTGTG TCCAACCCGC
GAACTGGCCG ACCAAGTGGC GCAGGAGATC CGCACACTGG CACGTGGTAT CCACAACGTA
AAAGTGCTTA CCCTCTGTGG CGGCGTGCCC ATGGGGCCGC AAATTGGTTC GCTCGAGCAT
GGCGCCCACA TTATCGTTGG TACGCCGGGG CGGATTGTCG ATCACTTAGA GCGTAACCGT
TTAGACCTAA GTAACCTGAA TATGCTCGTG CTAGACGAAG CCGACCGTAT GCTGGAAATG
GGCTTTCAGC CACAGCTCGA TGCGATTATC GAGCAGTCGC CACGCGAGCG CCAAACCCTG
CTGTTTAGTG CGACCTTCCC CGAGCAAATT CAGTCGATTG CTAAGCAAAT TATGTACGAC
CCAGTGATGG TGAAAGTGGC CGTGACCCAC GAAAAGAGCA CCATCGAGCA GCATTTCTAC
CACTTGGATG ACGACAAGGC GCGCATGCAG GCGCTGCAAT TATTGCTGCT GGATCGTAAG
CCCGAGAGCG CCGTGGTGTT TTGTAATACC AAGCGCGAAA CCCAAAAAGT GGCCGATGAA
CTAAGTGATG CTGGCTTTAG CGTTATCGCC CTACATGGGG ATTTAGAGCA GCGCGACCGG
GATGAAACCC TGCTGCAATT TGCCAACAAG AGTGCCTGTG TGTTGGTGGC AACTGATGTG
GCCGCCCGTG GCCTCGATAT CGACGCGCTG GACGCGGTGT TTAACTACCA CGTGGCTTAC
GATACCGAAG TGCATATTCA CCGTATTGGC CGTACCGGCC GTGCGGGCAG TAAGGGCGCG
GCTTTTACCT TCTTTGACGA TCAAGATGGC TACAAAATTG CGTTATTAGA AGAGTACTTA
GAGCGCGATA TTCAGAGCGA AGCCTTACCA TCATTAAGTT TGCTGGGCAC AGCGCCCAAT
GCACCAACCA TGATCACCCT GCAAATCGAT GGCGGTAAAA AAGAGAAGCT TCGCCCCGGT
GATATCCTCG GGGCCCTCAC TGGGGAGAAT GGCATCGAAG GCTCGCAGGT CGGCAAAATC
CTTGTGACCG ACTACCGCGC CTATGTGGCG GTGAATCGCA AAGTCGCTAA AAAGGCACTG
AGCAAAATCA CCAGCGGCCG CATTAAAGGT AAGTCCTACC GCGCGTGGTT AATGAAATAA
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| Protein sequence | MPARVTHHRI FALSNSDTQP SMAFSTLKLK PELLENLTTM GYHEMTPIQA QSLPAILAGE
DVIGQGKTGS GKTAAFGLGL LNKLDVKRFR IQTLVLCPTR ELADQVAQEI RTLARGIHNV
KVLTLCGGVP MGPQIGSLEH GAHIIVGTPG RIVDHLERNR LDLSNLNMLV LDEADRMLEM
GFQPQLDAII EQSPRERQTL LFSATFPEQI QSIAKQIMYD PVMVKVAVTH EKSTIEQHFY
HLDDDKARMQ ALQLLLLDRK PESAVVFCNT KRETQKVADE LSDAGFSVIA LHGDLEQRDR
DETLLQFANK SACVLVATDV AARGLDIDAL DAVFNYHVAY DTEVHIHRIG RTGRAGSKGA
AFTFFDDQDG YKIALLEEYL ERDIQSEALP SLSLLGTAPN APTMITLQID GGKKEKLRPG
DILGALTGEN GIEGSQVGKI LVTDYRAYVA VNRKVAKKAL SKITSGRIKG KSYRAWLMK
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