Gene Shewana3_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3362 
Symbol 
ID4477663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4031827 
End bp4033149 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID639727972 
Productsodium:dicarboxylate symporter 
Protein accessionYP_870992 
Protein GI117921800 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAC AAAGGTCATC AGCCCTAGGC CGGATCTGGT CTTCCTGGAT GTCAGTGCCC 
CTGTGGCTGC AAATTTTCGT TGGTATGGTG TTAGGGATTG CGGTGGGCGT CAGCTTAGGT
GAGCAGGCTT CATACCTGAA ACCTATTGGC ACCCTGTTTG TGAATACCAT CAAGATGCTG
ATTGTGCCTT TAGTGTTTTG TTCATTGATT GTTGGTGTGA CCTCAATGGA AGACACCGCC
AAAATGGGCC GAATTGGGTT TAAATCCTTT GCGTTTTATC TGTGCACCAC CGCGATTGCG
ATCAGCCTAG GTTTAGCCGT GGGCTATGTG GTGCAACCCG GTGCAGGCGT GCCTTTACTG
CAACACGAAG CGGTACAAAC GGCGAAAGAA GTGCCTTCGG TGATGCAAAC CCTGATTGAC
ATAGTCCCTA CCAACCCCGT TGCCGCCTTG GCGAGTGGTC AAATTCTGCA AGTGATTGTG
TTTGCCGTGG CCCTAGGGAT TGCCTTGGTC TTGATTGGCG ACCATGGTAA GCCTGCGATC
AAGGTATTTG AAAGCCTTGC CGAGGCCATG TACAAACTCA CCGACATGGT GATGAAGCTT
GCGCCTTATG GGGTGTTTGG TCTGATGGCA TGGGTCGCGG GCGAGTATGG CATCGACATG
CTGTGGCCGC TGATTAAAGT GATTATTGCC GTATATATTG GCTGTATTAT CCACGTGTTA
GGCTTCTACA GCATAGTGCT GCGCCTATTT GCTAAGCTAA ATCCACTGCA TTTCTTCAAG
GGGATCAGCA ATGCGATGGC GGTGGCATTT ACCACCTCAA GTTCGGCGGG TACCTTACCT
GCAAGCATGA AATGTGCGAG CGAATATCTC GGGGTAAATA AGAAGATCTC TAGCTTTGTG
CTGCCCTTAG GCACCACCAT CAATATGGAT GGCACCGCCC TATACCAAGG CGTGACCGCA
CTGTTTGTGG CGCAGGCCTT TGGTATCGAT TTAACTTGGG TCGACTATCT GACGATTATT
TTAACCGCGA CCTTAGCCTC AATCGGCACC GCGGGTGTGC CGGGCGCTGG CTTAGTGATG
TTGACCTTAG TGCTCTCGAC CGTGGGCTTG CCCTTAGAAG GCGTGGCCTT GATTGCGGGG
ATTGACCGTA TTCTCGATAT GGCGCGCACA GTGGTAAACG TTTCTGGCGA CTTAGTGGCG
ACGACTGTGA TTGCTAAGTC GGAAGATGAG CTCGATGTTG AGCATTACAA TGCCGATATG
GTGCAGAGCG CTATGATTGC CGAACAAAAT GCCGCGAGTG AAAGCGCCGC GACGAAAAGC
TAA
 
Protein sequence
MSKQRSSALG RIWSSWMSVP LWLQIFVGMV LGIAVGVSLG EQASYLKPIG TLFVNTIKML 
IVPLVFCSLI VGVTSMEDTA KMGRIGFKSF AFYLCTTAIA ISLGLAVGYV VQPGAGVPLL
QHEAVQTAKE VPSVMQTLID IVPTNPVAAL ASGQILQVIV FAVALGIALV LIGDHGKPAI
KVFESLAEAM YKLTDMVMKL APYGVFGLMA WVAGEYGIDM LWPLIKVIIA VYIGCIIHVL
GFYSIVLRLF AKLNPLHFFK GISNAMAVAF TTSSSAGTLP ASMKCASEYL GVNKKISSFV
LPLGTTINMD GTALYQGVTA LFVAQAFGID LTWVDYLTII LTATLASIGT AGVPGAGLVM
LTLVLSTVGL PLEGVALIAG IDRILDMART VVNVSGDLVA TTVIAKSEDE LDVEHYNADM
VQSAMIAEQN AASESAATKS