Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3349 |
Symbol | |
ID | 4477650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 4018028 |
End bp | 4018765 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639727959 |
Product | hypothetical protein |
Protein accession | YP_870979 |
Protein GI | 117921787 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3137] Putative salt-induced outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000236372 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAG TACTGACCGC AGCGCTATTA ATGACTGCGC CATTTATGGC TAATGCGGGA GCCGATTTTG TAAAAGGCGA CAAGACATTC GCAGGTGAAG CCGAGTTAGG TGCAACCTTA ACCACAGGTA ACACCGATAC CTCATCCTAC AAGGGCCGCT TAAGCCTAAA ACACGAACTA GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTGTACA AAGAAGATAC GGGTGAAGTG ACAGCTAAAC GTTATTTAGC GGGTGCTCAA GGCAACTATA AGATGACAGA TCGCAGCTAT CTGTTTGCCA ACGCTAACTA CGAAGTCGAC CCTTTTACCG GTTATGACTA CACAGTTTCA GGCGCGGCGG GTTATGGTCA CAGACTCTAT GACACCAGCA AGACCTTCTT GGATGTGGAA ATCGGTCCCG GTTACATCTA TCAACGCCTC GATTCAGAGC AAGCCCTGCT AGAAGGCACA GACTCGAATG ACAGTGTGGT TGCCCACGGC GTGATCAACT TCGAAACTGA AATCACTGAA ACCTCAAAAT TCCAGCAACG TTTTGTGGCC GACTACGGCG ATAAATTAGA TGCGCGTTCA GAAACCTCGC TGACTGCCAA TATTATTGGC GCCTTGGCGA TGAAGTTTGC GATTATCGTG CGTTACAACA GCGAGCCGCT GGATGATAAA AAGAGCACTG ATACCGAAAC GAATATGACC TTGCTCTACT CGTTCTAA
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Protein sequence | MKKVLTAALL MTAPFMANAG ADFVKGDKTF AGEAELGATL TTGNTDTSSY KGRLSLKHEL GDWENQYLLE GLYKEDTGEV TAKRYLAGAQ GNYKMTDRSY LFANANYEVD PFTGYDYTVS GAAGYGHRLY DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT LLYSF
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