Gene Shewana3_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3349 
Symbol 
ID4477650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4018028 
End bp4018765 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID639727959 
Producthypothetical protein 
Protein accessionYP_870979 
Protein GI117921787 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000236372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TACTGACCGC AGCGCTATTA ATGACTGCGC CATTTATGGC TAATGCGGGA 
GCCGATTTTG TAAAAGGCGA CAAGACATTC GCAGGTGAAG CCGAGTTAGG TGCAACCTTA
ACCACAGGTA ACACCGATAC CTCATCCTAC AAGGGCCGCT TAAGCCTAAA ACACGAACTA
GGTGACTGGG AAAACCAATA TCTTTTAGAA GGTTTGTACA AAGAAGATAC GGGTGAAGTG
ACAGCTAAAC GTTATTTAGC GGGTGCTCAA GGCAACTATA AGATGACAGA TCGCAGCTAT
CTGTTTGCCA ACGCTAACTA CGAAGTCGAC CCTTTTACCG GTTATGACTA CACAGTTTCA
GGCGCGGCGG GTTATGGTCA CAGACTCTAT GACACCAGCA AGACCTTCTT GGATGTGGAA
ATCGGTCCCG GTTACATCTA TCAACGCCTC GATTCAGAGC AAGCCCTGCT AGAAGGCACA
GACTCGAATG ACAGTGTGGT TGCCCACGGC GTGATCAACT TCGAAACTGA AATCACTGAA
ACCTCAAAAT TCCAGCAACG TTTTGTGGCC GACTACGGCG ATAAATTAGA TGCGCGTTCA
GAAACCTCGC TGACTGCCAA TATTATTGGC GCCTTGGCGA TGAAGTTTGC GATTATCGTG
CGTTACAACA GCGAGCCGCT GGATGATAAA AAGAGCACTG ATACCGAAAC GAATATGACC
TTGCTCTACT CGTTCTAA
 
Protein sequence
MKKVLTAALL MTAPFMANAG ADFVKGDKTF AGEAELGATL TTGNTDTSSY KGRLSLKHEL 
GDWENQYLLE GLYKEDTGEV TAKRYLAGAQ GNYKMTDRSY LFANANYEVD PFTGYDYTVS
GAAGYGHRLY DTSKTFLDVE IGPGYIYQRL DSEQALLEGT DSNDSVVAHG VINFETEITE
TSKFQQRFVA DYGDKLDARS ETSLTANIIG ALAMKFAIIV RYNSEPLDDK KSTDTETNMT
LLYSF