| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3307 |
|---|
| Symbol | |
|---|
| ID | 4477608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3969110 |
|---|
| End bp | 3969832 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639727917 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_870937 |
|---|
| Protein GI | 117921745 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.199606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCG CGCCAATGCC TGAACCCTTA TCGCAAATCC TGTTAATTGA AGACGACCAA
CCCCTTGCCG AACTGGTCTG CACTTATTTA ACCCAAGAAG GTTACAAGCT TATCCATTTA
GATAATGCCG AAGACGCGCT GATCCGCCGG GATACCGATG AGTTTGATCT GATCATTTGC
GATGTCATGC TGCCAGGGCA AGATGGCTTT AGTATTTACC CGCAGTTAGC GGCGAGTTAT
CCCTGCCCGA TTATCTTCCT GACGGCGCTC GATAATCATG CCGACCAAAT TCGGGGATTA
AATCTTGGCG CCTGCGATTA CTTGCTCAAA CCCGTAGTGC CGCCTTTACT GCTGGCACGG
ATTAAGGCCA ATCTGCGCAA ACAGCAATCC AGCAGTAGCC GCAGTAAACT TAAGTTACAC
GACCTATTTT TAGACCCCAA CCTACAGCAA GTGAATCTGG GTGATGAAGC CTTATCTTTT
ACCACTAAGG AGTTTTCACT GCTGTGGATC TTCGCTCTGC ACGCCGGCAA AGTGCTGTCG
CGGGAGTTTT TGTTCGAGCA ACTCGTGGGC CGCGAATATG ATGGTTTAGA CAGGGCTATC
GACTTAAAAA TCAGCCGCCT ACGTAAACGT TTAGATGAGC TGAATGTACC GGGACTGGCC
ATAACGACTA TTCATGGGAA AGGTTATTTA TTCAATTACT TGCCAACCCA AGGTCGGACC
TAA
|
|---|
| Protein sequence | MTSAPMPEPL SQILLIEDDQ PLAELVCTYL TQEGYKLIHL DNAEDALIRR DTDEFDLIIC
DVMLPGQDGF SIYPQLAASY PCPIIFLTAL DNHADQIRGL NLGACDYLLK PVVPPLLLAR
IKANLRKQQS SSSRSKLKLH DLFLDPNLQQ VNLGDEALSF TTKEFSLLWI FALHAGKVLS
REFLFEQLVG REYDGLDRAI DLKISRLRKR LDELNVPGLA ITTIHGKGYL FNYLPTQGRT
|
|---|
| |