Gene Shewana3_3305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3305 
Symbol 
ID4477606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3967862 
End bp3968704 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content45% 
IMG OID639727915 
ProductMltA-interacting MipA family protein 
Protein accessionYP_870935 
Protein GI117921743 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0180467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTTA ACGTCAGAAA ACAATGCTTA CCGCTCGTAC TACTACTGAG TTGGTGCACC 
ACACTGCAAG CTAAAGAAAT TGAAACTGTT TCCGCCGGAG ACTGGCAGAT TTCCCTTGCC
GCAGGTTATG GCGCACTCGA AAACCCAAGG GCAAAAGTTG AAAATATCAA CACTTGGATA
CTGCCCACTT GGTATTACTA CGGTAAGAAC TTTTATGTCG AAAACTTCAC CTTAGGTTAC
AGCCTGTACG AGTCAGAAAG CTTTATTGTC GACCTACAGA CACGTTTTAA TGAGGACGGT
TTTTTCTACG AATTCGATGG ACTGAATAAA CTATTACTGA GTGATATTTT AGGTTATACC
CCAGTGAAGC AGCCCATCAA TCCTAAAGTC GTCAAATTCG AGGAAATTGA ACGCAATCTT
TCCTACCTAG GTGGACTCAA TGCCACTTGG GTGACGCCCT ATCTCGATAT CAGCCTAGGT
TACTTCCACG ATATTACCGG CGTTCACCAA GGTAACGAGA TCCAGCTTAG ACTCAAACGC
AGTCAGGCAT TTTCATGGGG AGCGCTCGGC TTTGAGATTG GGGCAATTCG AAAGAGTGAA
AACCTCGTCG GCTACTACTA TCAGCTCACT AAAGAGGAAG AAGGCCCGCT GCGAACCAAA
TATCAACCCT CAGCCGCCAT CAATTACCAT GCCCGCAGCG TGGTCAATGT GCCAATTTTC
GACAGCGTTA ACTTTGTGGC TATACTCGAA TATACTTGGT TAGGACAAGA AATCACTGAC
AGCGTATTGA TAGATAAAGC TGGCTATGTT TCTGGATTTG TTGGAATTAG CTATGACTTC
TAA
 
Protein sequence
MTVNVRKQCL PLVLLLSWCT TLQAKEIETV SAGDWQISLA AGYGALENPR AKVENINTWI 
LPTWYYYGKN FYVENFTLGY SLYESESFIV DLQTRFNEDG FFYEFDGLNK LLLSDILGYT
PVKQPINPKV VKFEEIERNL SYLGGLNATW VTPYLDISLG YFHDITGVHQ GNEIQLRLKR
SQAFSWGALG FEIGAIRKSE NLVGYYYQLT KEEEGPLRTK YQPSAAINYH ARSVVNVPIF
DSVNFVAILE YTWLGQEITD SVLIDKAGYV SGFVGISYDF