| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3301 |
|---|
| Symbol | |
|---|
| ID | 4477602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 3955522 |
|---|
| End bp | 3960531 |
|---|
| Gene Length | 5010 bp |
|---|
| Protein Length | 1669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639727911 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_870931 |
|---|
| Protein GI | 117921739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAACGC TATTTAGGAC GGGTCAGATC AATGAAATAA ATACCCAGCA AGCTAAAACT
GAATCGACTC AGCAGGGCGT TGGGGTAAAT ATTCAAATCA ATCCTCAAGT GCGTAAGTTT
CAATATGAGG AAGGTTTGAC TGGTGAGCAG GTTTATATTG TTCGATTAAA CCAAAAGCCA
TTGGCACAGG TAAGTGCAGA ACTGTTAGGA ACGGATACCA CTCAAGCGCG CTCATCTAAG
GCATCTAAGC TGTATGTTGC GGGTCAACCT GCAAACCGTG CCGTACAAAA TTACCGTGCA
CAATTGCTTA ACACCCAAAA GCAAGTACTG GCTGACATTC AGTCAAATGT AGGTGCGCGT
CAAGCTCGCC AACAGTTTAC TAATGCGGTA AACGGTTTCT CTATCGCGAT GACCCAGGAA
GAGGCACAAC GTGTTGCCCA GCTTCCTAAT GTTGCCTCCG TTCGTTTATC AAAAACCTAT
GAATTACAGT CTGATGCCGG TCCACAACTG ATCGAAGCAG ACAAAATTTG GACTGGTACT
GCTACACCTG ACGGCCTGCC TTATAAAGGT GAAGGTATTA TCATGGGTAT CATCGATACT
GGTGTAAATA CGGATCACCG CTCATTTGCC GCTATCGGCG ATGATGGCTA CAAACACGAA
AACCCTTGGA CAGCCGGTAA ATATGTCGGT GATTGTACCA AGGTCGGTTT TGAGAGTCTG
TGTAACGATA AGTTAATCGG TGTTCGTTCA TACCCAATCA TTACCGATAA CTTTACCAAT
GGTAACTATG AGGTAACTCG TCCTGCTGTG GGTGAGGATT ACCAAGGACA TGGTTCACAC
ACCGCGTCAA CTGCTGCGGG TAACGTGCTA TTAAACGTTG ATTACCTTGC GGGTGTGAGC
GACACGGAAG CTTCGGATGG CCGAGTTATC AAAGCCGGTC TCTTCCCAAG TATCAGTGGT
GTTGCACCCC ATGCGAACAT TGTTTCTTAC CAAGTGTGTT ATCCCGATAA CCATATTGGC
GCGGGTTGTC CAGGCGAAGC ATTGGTCGCG GGTATTGAAG ACGCGATCAA AGATGGCGTA
GATGTGATTA ACTTCTCTAT CGGTGGTCAA GAGTCGAATC CTTGGGCGAG CGATGTTGAG
TTAGCCTTCC TTGCTGCCCG TGAAGCCGGT ATCTCCGTTG CCGTTGCGGC GGGTAACTCA
GGCCAATACA ATGGCTCAGC GGAATACTTC GGTAAAATTG ACCATGCTTC ACCATGGTTA
TTGAGTGTTG CTGCAACTAC CCATGATCGC GTAATTGATA TTACAACAAA ACTGGTAAAT
CCAGTTGGTG GTTCAACAGT TCCAACTTGG ACTGAAATTT CCGGCGGCGT GATCAACAAC
GAATCTGTGA CTGGCCACGT GGTAATGGCT GCAAATCATG GTGATCAATA TTGCGCCAAT
AAATTCGCTG CCGATACCTT CGTTTGGAAG GATGCCGATG GTAATCCTAC CGATGAGAAC
GTGATTGTAG CCTGTCGTCG TGACAGTACG ACCAGCACTA CAGGTACAGC CCGTAGCGTG
AAAGCCGACA ACGTTAAGGC TGGCGGCGCC GATGGTATGA TCCTGTATAA CTATGCAGCC
GGTGAAGCGA TTGTTCCTGC TGTATCTTAC TCTGTACCTT CAATTCATAT CACCCAAGAA
AATTGGGGGA CGTCTAACAG CGGTGGACTA TACACTTGGT TAAGAAATGG TACTGACCAA
GTCATCACTA TCACTGCCAC TGACATTGAG CGTACTCTCG ATCCATCTAA AGCCGATTGG
TTAGCGGCCT TCTCATCACG TGGTCCAAGT ACTTCAACGC CTGAAGCACT GATCCCAGCG
GTTGCTGCGC CTGGTGTTGA TATTTTTGCT GCCTATGCTG ACGAGCATCC ATTCGATACT
ACCTCGCCAT CAAGTGACTT TGCGATGATC AGCGGTACTT CAATGGCATC GCCACATGTT
GCAGGTTCTA TGGCATTGAT TCGTCAAGCC CATAAAGATT GGACTGCGAC AGAAGTACAA
TCTGCACTGG CAATGACGAC GGAGAACAAA GTTCAATATC GTCGTTTGAA CTCTTCAACA
GGTGATGTTG AGCTGGCTTC AACCTACCGT GCAGGTACTG GCCGTATTAA CGTGAAAAAT
GCGATTAATG CAGGCTTTGT GATGGATGAA ACCATCGATA ACTTCAAAGC GGCTAACCCT
AATAATGGTG GCGTACTGCA TAAGCTGAAC ATTCCACAAT TAGTCAACTT TGAATGTAAA
CCAAAGTGTC AATGGATCCG TACCATTCGC GCGACTAAAG ACGGCAGTTG GAGCGTGACT
AACGGTGATG TGATCAACTG GAATGTAGAC TCACAAAAAC AAGCTAATCA GAACGGTGTC
ACCATCAAAG CCTATCCAAG CGAATTTACG CTGAAGGCAG GTGAAACCCT GGATATCGTG
ATTGAAGCCT CAATCATGGA CACCCAAGAT TTGTTTAGTA ACGCCGAAGT AGAGCTGCAT
TCGAACTTGA TTTTTACTGA ATCGACAGAG AGTGCACCAG AGGCCCATTG GCCAATCGTA
TTCAAATACG ATAACAACAA TATGCCATCA TACTTAAGAA CGACGGCGCA CCGTAATAAC
GCCAGTGCCG TATTTAAGGG GATTGATTTA CCTGAAGGTG ATAGCATTCA CGGTCGTATT
TTTGAACCCG CGAAAGCTAC CATTAAAACG GCGACCCTGC CAAAGGATGA TGAAAATATC
TACCCGTGGG ATTTACTTCA AGTTCCTGCT GGAGATGATA TTAAGAATGT TATCGATGAA
GCAACTCACG TTGAGATGAT CGATGTACCA GCCAATAGTC GTCGTCTGAT TGTTGAAGTT
TTAGGCAAAA TGCAGTCTCC GTTAGAGGGG GACTGGAATA AAGGTAACAT TCAAATTTAT
GTGGGTAAGG ACTATAACGG TAACGGTCAG CCAGATCCGT TAGAAGAAAT CGTCTGCGTG
TCGAACGATG CTATCTACAA TAACTTCTGT AATATCAATA ACCCAGATGA AGGTACCTAT
TGGGCCGTTT TCTATAACCC AAGAAAAGGC TCAGACTCTA ACAACTTCAA CGCCGGTGTA
ATGGAAACCT TCCAATATAC AACAACAGTT TTGTCTGACC GAGTTGCCAG CAATATGGGG
GTTGAAGTCC CTGCCAGTAA TGGTACCGAT GCGGTTGATA TCACGGTTAA CTGGGATATC
CCAGAGATGA GCGAGGGTGA TGTTTACTAT TCGCTAGTTG ACTTTGGTAC TTCTGCAGTA
AATGCGGGTA ACATAGGTAA AGTGGCCTTT AAACTGAACC GCGGTGTGGA TGACGTTAGT
TTAGATACCA CCCAAACTAA GGCGCTAGTA GGTCAAACCC TGCCATTTAC CTTTGAGGTT
CAGCCAAACG ACTCGGGTGC GGACCGCGCC TTTAGCATCG AAGCAACCAT TCCAGAAGGC
TTAAGCCTGA AAGCGGAAGA TGTGTATAGC TCATCAAGCG CTATCGTTAA AGACATCAAA
GTTGAAGGTA AAAAGCTGAC CATCAGCGGC GTTCAACCGA ACACGCTAGG TGATTATGCC
CATTACAATA TCACCACTAA TGAAACAGAC CCACTGTGCC GTACACCAAA CTTTGGTAAC
AGCAACCCAG GTGGTTACGT TGACTTAGAA GAGTTTGGTT TGTTGCCATC TTACAGTGGT
TTTGAGCCAA CAACGCTTGG CGCTAATGGC AAAGTTGTAA CAGGTGGCAC TAACAACATT
CGTTACCAAA ACGGTGTGCA GATCCCGATC AGTACCTTGT TTAGCGGTAA CACGACGGGT
TACCACCTGT ATAACAATGC CGATACCATG AACATTTGGA ATAACAATAG TCTGCAAATT
TTAGGTACGG GTATCATCAA CTTATACCAA AATGAGAAGA TTTTCTTCCC TTGGCATGAC
ATCTTCCCGT ACAACAATGC GCCATGGGCG AGTATCGGGG TGTTATGGCG TGCATTTGAC
TACAAATATA CCGTTCAAGA TCTGATGAGC GTGCCATTAA TTCACGGTTC TGAAGTGGCG
GGTATTACGA TTGGTAGTAC TTCCGATGGT TGGGGCATTA TTGAATGGGA TAATGCTCGT
TCCTATGGTC AGTTATCTAA CGATCCAACG ACCAATGCTA AACGTTGGGA AGAACGTGAC
GACAGATTCG ACTTCGAACT GCTGTTCAAT GTTAACACCC GCTTTGGTGA CGGTGAGTAC
GAGTTGATCA TGGCCTATGA CAATATCGAC TATGGTAGCC AAGATGACCG TGGTTCTATC
GGTCTGCAGG GCTTCAAAGG CGCTTTATCT AAGCTAGGTC CAGATGGTGG TTATAAGGGT
GAGCAATACG CTTGGAACAA CCTGAAGGAC AAGATCCGCA ATGGTTTAGT TGTTTGTTAC
GACTACGTCG GTCCTGAGTC ATCACAATTT GAAGTGACGG CTTGGACTAA AGTCACTACA
AATGCACCAG GTAAAGCCTT AACTGTGGAT GCGGTCAGTC AGATTGATGG TATGGCGAAC
ATCAGCATGT CACGCACAGT CACTGTACCA AGTAACATCA CTGTGGCTCG CATTGCTAAC
CAAACGATTG CGGAAAACAC GAGCTTAGAA GGTCTGAAGG TTGTGTTTGC CGACGAGCAA
AACAGCGTGA ATAAGATCAC CGTAACGGGT GAGCACATCA GCGCTGTGGT AAATGGCAAC
ACTTCAGGTT CAACTATCAC TATTACACCA GAAGCTAATT TCCACGGCGA TGTAGAAGTC
ACAGTGACTG TGAGTGATGT GGAAAACCCA GCCGATGCAG CGAGCACCAG CTTTATGCTG
ACCGTTGAAT CCGATGGTGT TGAGCCGACT GCGCCTGTAA CACCGACTAC ACCAGAAACT
CCTGCGAAAG AAAGCAGCGG TGGTGCTTTA GGTGGTTTAT CTATGCTACT GGCTCTCGGG
GCATTGATCA GAAGAAGAAA AACTCACTAA
|
|---|
| Protein sequence | MSTLFRTGQI NEINTQQAKT ESTQQGVGVN IQINPQVRKF QYEEGLTGEQ VYIVRLNQKP
LAQVSAELLG TDTTQARSSK ASKLYVAGQP ANRAVQNYRA QLLNTQKQVL ADIQSNVGAR
QARQQFTNAV NGFSIAMTQE EAQRVAQLPN VASVRLSKTY ELQSDAGPQL IEADKIWTGT
ATPDGLPYKG EGIIMGIIDT GVNTDHRSFA AIGDDGYKHE NPWTAGKYVG DCTKVGFESL
CNDKLIGVRS YPIITDNFTN GNYEVTRPAV GEDYQGHGSH TASTAAGNVL LNVDYLAGVS
DTEASDGRVI KAGLFPSISG VAPHANIVSY QVCYPDNHIG AGCPGEALVA GIEDAIKDGV
DVINFSIGGQ ESNPWASDVE LAFLAAREAG ISVAVAAGNS GQYNGSAEYF GKIDHASPWL
LSVAATTHDR VIDITTKLVN PVGGSTVPTW TEISGGVINN ESVTGHVVMA ANHGDQYCAN
KFAADTFVWK DADGNPTDEN VIVACRRDST TSTTGTARSV KADNVKAGGA DGMILYNYAA
GEAIVPAVSY SVPSIHITQE NWGTSNSGGL YTWLRNGTDQ VITITATDIE RTLDPSKADW
LAAFSSRGPS TSTPEALIPA VAAPGVDIFA AYADEHPFDT TSPSSDFAMI SGTSMASPHV
AGSMALIRQA HKDWTATEVQ SALAMTTENK VQYRRLNSST GDVELASTYR AGTGRINVKN
AINAGFVMDE TIDNFKAANP NNGGVLHKLN IPQLVNFECK PKCQWIRTIR ATKDGSWSVT
NGDVINWNVD SQKQANQNGV TIKAYPSEFT LKAGETLDIV IEASIMDTQD LFSNAEVELH
SNLIFTESTE SAPEAHWPIV FKYDNNNMPS YLRTTAHRNN ASAVFKGIDL PEGDSIHGRI
FEPAKATIKT ATLPKDDENI YPWDLLQVPA GDDIKNVIDE ATHVEMIDVP ANSRRLIVEV
LGKMQSPLEG DWNKGNIQIY VGKDYNGNGQ PDPLEEIVCV SNDAIYNNFC NINNPDEGTY
WAVFYNPRKG SDSNNFNAGV METFQYTTTV LSDRVASNMG VEVPASNGTD AVDITVNWDI
PEMSEGDVYY SLVDFGTSAV NAGNIGKVAF KLNRGVDDVS LDTTQTKALV GQTLPFTFEV
QPNDSGADRA FSIEATIPEG LSLKAEDVYS SSSAIVKDIK VEGKKLTISG VQPNTLGDYA
HYNITTNETD PLCRTPNFGN SNPGGYVDLE EFGLLPSYSG FEPTTLGANG KVVTGGTNNI
RYQNGVQIPI STLFSGNTTG YHLYNNADTM NIWNNNSLQI LGTGIINLYQ NEKIFFPWHD
IFPYNNAPWA SIGVLWRAFD YKYTVQDLMS VPLIHGSEVA GITIGSTSDG WGIIEWDNAR
SYGQLSNDPT TNAKRWEERD DRFDFELLFN VNTRFGDGEY ELIMAYDNID YGSQDDRGSI
GLQGFKGALS KLGPDGGYKG EQYAWNNLKD KIRNGLVVCY DYVGPESSQF EVTAWTKVTT
NAPGKALTVD AVSQIDGMAN ISMSRTVTVP SNITVARIAN QTIAENTSLE GLKVVFADEQ
NSVNKITVTG EHISAVVNGN TSGSTITITP EANFHGDVEV TVTVSDVENP ADAASTSFML
TVESDGVEPT APVTPTTPET PAKESSGGAL GGLSMLLALG ALIRRRKTH
|
|---|
| |