| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3282 |
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| Symbol | metH |
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| ID | 4477391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 3922433 |
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| End bp | 3926167 |
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| Gene Length | 3735 bp |
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| Protein Length | 1244 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639727892 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_870912 |
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| Protein GI | 117921720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAT CTCTCCATCG AGCCAGCCAA ACACTGGCAG ACATTCGCAA CCAGTTGTCA
AAGCGCATTC TGATTTTAGA CGGCGCCATG GGCACTATGA TCCAAGGCTA CAAGCTTGAG
GAAGAGGATT ACCGTGGCGA GCGCTTCAAG GATTGGCATA CCGACGTTAA GGGTAATAAC
GATCTTTTAG TGCTCACACA GCCACACATC ATCAAACAAA TTCACATCGA CTACCTTAAA
GCCGGTGCGG ATATTATTGA AACCAACACC TTCAACGCCA CTACTATCGC CATGGCCGAC
TACGATATGC AGTCGCTGTC CGCCGAAATT AACCGTGAAG GTGCGCGTCT CGCCCGCGAG
GCCTGTGATG AAATCGAGCA GGCCACGGGT AAGCCACGTT ATGTCGCCGG AGTGTTAGGG
CCCACTAACC GCACTTGTTC TATCAGCCCG GATGTTAACG ATCCCGGATA TCGCAATATC
CACTTCGATG AGTTAGTGAC CGCTTACTGC GAATCGACCC GCGCCTTAAT TGAGGGCGGC
GCCGATATAA TTATGGTCGA GACCATCTTC GATACCTTAA ACGCTAAGGC CGCCTTATTT
GCCATCGAAA CCGTGTTCGA TGAACTCTTT GGGCCAAATT CACCCGCGCG TTTGCCGGTT
ATGATCTCAG GCACTATTAC CGATGCCTCG GGCCGAACCC TTACCGGACA AACCACCGAA
GCCTTTTATA ACTCCCTTCG CCATATCAAG CCCTTATCCA TCGGCCTTAA CTGCGCCCTC
GGCCCTAAGG AGCTACGCCC CTACGTCGAA GAGCTGTCGC GCATCGCCGA GTGTTATGTC
TCGGCGCATC CTAACGCGGG TCTGCCAAAC GAGTTTGGCG GTTACGATGA AACCCCAGAG
GATATGGCGA GCGTTATCCA AGAATGGGCC CGCGAAGGCA TGCTCAACAT TATCGGCGGT
TGCTGTGGTA GCACGCCCGA GCATATTAAG GTCATTCGCG AAGCCGTCGA GCCGTTTGCA
CCACGGGTAT TGCCCGAGAT CCCCGTCGCC TGCCGTCTCT CTGGTTTGGA ACCGCTCACT
ATCGACGCCC AAACCCTGTT TGTGAACGTG GGTGAACGTA CCAACGTCAC CGGTTCGGCC
AAGTTTTTAA AACTGATCAA AGAAGGTAAG TTCGAGCAGG CGCTCGATGT CGCCCGCGAG
CAGGTAGAAA GCGGCGCGCA GATCATCGAC ATCAATATGG ACGAAGGCAT GCTCGATGGC
GTAGAGGTAA TGCATAAGTT CTTAAATCTT ATCGCCTCTG AGCCGGATAT CAGCCGCGTG
CCGATTATGA TCGACTCCTC AAAGTGGGAG GTGATTGAAG CGGGCCTCAA ATGTATTCAA
GGCAAGGGAA TCGTAAACTC TATCTCCTTG AAGGAAGGCG AAGAGAAGTT TATCGAGCAG
GCAACCCTAG TGAAACGCTA CGGCGCCGCG GCGATTATTA TGGCGTTCGA CGAGCAAGGG
CAGGCCGACA CTAAGGCGCG CAAAGTCGAG ATCTGTACCC GCGCCTACCG CGTGCTAGTC
GATAAGGTCG GCTTTCCGCC CGAAGACATT ATCTTCGACC CGAATATCTT CGCCATCGCC
ACGGGTATCG ATGAGCACGA TAACTATGCC GTCGATTTTA TTGAAGCCAT TAAAGAGATT
AAGGCCACCC TGCCCCACGC GATGATTTCC GGCGGGGTGT CGAACGTGTC GTTCTCCTTC
CGCGGTAACA ATCCAGTGCG TGAGGCGATT CACGCGGTGT TCCTGTACCA CGCGATTAAA
GTCGGCATGG ACATGGGTAT CGTTAACGCG GGCCAATTAG CGATTTACGA TGATATCGAC
CCCGAGCTAA AGGATAAGGT CGAGAATGTG GTGCTTAACC TGCATTGCCC AGTTGAAGAC
TCAAACAACA CCGAGCAATT GCTTGAGATT GCTGAAAAAT TCCGTGGCGA TGGCTCAAGT
AGCGCGAAAA AAGAAGACTT AGAATGGCGC TCATGGCCGG TGAATCAACG TCTCGCCCAT
GCGCTGGTCA AAGGCATCAC CGAATTTATC GACGAAGATA CCGAAGCGGC TCGTCAGCTC
GCATCCCGTC CTTTGGATGT AATTGAAGGC CCGCTGATGG ATGGGATGAA CATCGTCGGC
GACCTGTTTG GCTCGGGCAA AATGTTCCTG CCACAGGTAG TGAAGTCGGC GCGGGTGATG
AAAAAGGCCG TGGCCTACCT CAACCCCTTT ATTGAGCAAG AGAAGGTCGA AGGCCAATCT
AACGGCAGAA TTTTGATGGT CACGGTGAAG GGCGATGTGC ACGATATCGG CAAGAATATT
GTCGGCGTTG TGCTCGCCTG TAACGGCTTT GAGGTATTCG ATTTAGGCGT GATGGTGTCG
GTGGAGCGCA TTCTTGAGGC CGTGAAAGAG CACAATATCG ACATTATCGG CATGTCTGGG
CTTATCACCC CAAGCCTCGA TGAGATGGTG CACAATGTGA AAACCTTCCA TCGCGAAGGC
CTCACCATTC CGGCGATTAT CGGCGGCGCC ACCTGCTCGA AAATTCATAC CGCAGTGAAG
ATTGCGCCCC ATTATCCCCA TGGCGCGATT TACATTGCCG ATGCCTCCCG CGCAGTGCCT
ATGGTCAGCA AGCTCGTCAG CAACGAAACT CGCCAAGCGA CTATCGATGA GACCTACGCC
GAATACGAAG AGATGCGCAT TAAGCGTTTA TCGCAAACCA AGCGTAAGGA AATCGTCTCG
CTGGAGGCCG CCCGCGAAAA CCGCTGTCAG CACGACTGGG CAAACTACAC CCCGTTCAAG
CCCAATGTGC TGGGTCGCCA AGTGTTTGAT GATTATCCAT TAACCGACTT AGTCGACCGT
ATCGACTGGA CGCCGTTTTT CCGCGCCTGG GAGCTGCACG GCCATTACCC CGAGATCTTA
ACCGACAAAG TGGTGGGCGT TGAGGCGCAG AAACTGTTCG CCGATGGTCA GGCGATGCTT
AAAAAAATCA TCGATGAAAA ATGGCTCACC GCCAAGGGCG TGATTGGGCT ATTCCCCGCC
AATACCGTCG GCTTCGATGA TATTGAGCTC TATACCGACG AGACTCGCAC CGAAGTCGAA
ATGACCACCC ATCACCTGCG GATGCAGCTT GAGCGGGTGG GTAACGATAA CTTCTGTCTG
GCCGACTTTG TGGCGCCAAA AGACAGCGGC GTTGCCGATT ATATGGGCGG CTTTGCGGTG
ACCGCTGGCC ATGGTATCGA CGAGCATATC GCCCGCTTTG AGGCCAACCA CGATGACTAC
AACGCCATTA TGCTCAAGTG TTTAGCCGAC CGTTTAGCCG AAGCCTTTGC CGAGCGGATG
CACGAACGCG TACGTAAGGA ATTCTGGGGT TATGCCGCCG ATGAGCAACT CGATAACGAA
GCCTTAATTC GCGAGAAATA CAAAGGCATT CGTCCTGCGC CGGGTTACCC AGCTTGCCCG
GATCACACCG AAAAAGGCCT GTTGTGGGAC TTGTTAAAGC CGAATGAAAC CATCGACTTA
AACATCACCG AAAGCTACGC CATGTTCCCC ACCGCCGCAG TATCCGGCTG GTACTTTGCC
CACCCGAAAT CCCGCTACTT TGGCGTGACC AATATTGGCC GCGATCAGGT GGAGGATTAC
GCTAAGCGTA AGGGGATGAC AGTCGCTGAG ACGGAGAAGT GGCTAGCGCC AGTGTTGGAT
TATGACCCTG AATAG
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| Protein sequence | MAISLHRASQ TLADIRNQLS KRILILDGAM GTMIQGYKLE EEDYRGERFK DWHTDVKGNN
DLLVLTQPHI IKQIHIDYLK AGADIIETNT FNATTIAMAD YDMQSLSAEI NREGARLARE
ACDEIEQATG KPRYVAGVLG PTNRTCSISP DVNDPGYRNI HFDELVTAYC ESTRALIEGG
ADIIMVETIF DTLNAKAALF AIETVFDELF GPNSPARLPV MISGTITDAS GRTLTGQTTE
AFYNSLRHIK PLSIGLNCAL GPKELRPYVE ELSRIAECYV SAHPNAGLPN EFGGYDETPE
DMASVIQEWA REGMLNIIGG CCGSTPEHIK VIREAVEPFA PRVLPEIPVA CRLSGLEPLT
IDAQTLFVNV GERTNVTGSA KFLKLIKEGK FEQALDVARE QVESGAQIID INMDEGMLDG
VEVMHKFLNL IASEPDISRV PIMIDSSKWE VIEAGLKCIQ GKGIVNSISL KEGEEKFIEQ
ATLVKRYGAA AIIMAFDEQG QADTKARKVE ICTRAYRVLV DKVGFPPEDI IFDPNIFAIA
TGIDEHDNYA VDFIEAIKEI KATLPHAMIS GGVSNVSFSF RGNNPVREAI HAVFLYHAIK
VGMDMGIVNA GQLAIYDDID PELKDKVENV VLNLHCPVED SNNTEQLLEI AEKFRGDGSS
SAKKEDLEWR SWPVNQRLAH ALVKGITEFI DEDTEAARQL ASRPLDVIEG PLMDGMNIVG
DLFGSGKMFL PQVVKSARVM KKAVAYLNPF IEQEKVEGQS NGRILMVTVK GDVHDIGKNI
VGVVLACNGF EVFDLGVMVS VERILEAVKE HNIDIIGMSG LITPSLDEMV HNVKTFHREG
LTIPAIIGGA TCSKIHTAVK IAPHYPHGAI YIADASRAVP MVSKLVSNET RQATIDETYA
EYEEMRIKRL SQTKRKEIVS LEAARENRCQ HDWANYTPFK PNVLGRQVFD DYPLTDLVDR
IDWTPFFRAW ELHGHYPEIL TDKVVGVEAQ KLFADGQAML KKIIDEKWLT AKGVIGLFPA
NTVGFDDIEL YTDETRTEVE MTTHHLRMQL ERVGNDNFCL ADFVAPKDSG VADYMGGFAV
TAGHGIDEHI ARFEANHDDY NAIMLKCLAD RLAEAFAERM HERVRKEFWG YAADEQLDNE
ALIREKYKGI RPAPGYPACP DHTEKGLLWD LLKPNETIDL NITESYAMFP TAAVSGWYFA
HPKSRYFGVT NIGRDQVEDY AKRKGMTVAE TEKWLAPVLD YDPE
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