Gene Shewana3_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3253 
Symbol 
ID4477362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3894848 
End bp3895654 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content50% 
IMG OID639727863 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_870883 
Protein GI117921691 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTT TAGTGTTTAT CGCCCTGATG CTGCTGAGTA TGTCAGCCTG TAGTTTGATC 
CCAAAGCCTG ACTTAAATAT CACGCCCGCT CAAGTTAATC CGATGAGTGA GGTGATGAAA
GGGCTACAGA ATCAGCCTGG GCCTAAGTTT CCTATCCCTG TGGCCGTGTA TTCATTTCGC
GACCAAACGG GCCAGTATAA GCCTCAGGCG AACGTGAGTT CATTCTCTAC TGCGGTTACA
CAAGGGGCGA CATCGATGCT GATGCAAACC TTGATTGACT CTAAATGGTT TACGCCCGTT
GAGCGTGAGG GCCTGCAAAA CCTACTGACC GAGCGCAAAA TCAGCAACAA ACAAAATGGT
ACTAAGGGTG ATGATATTCC AGTGTTATCG ACGGCGAGAT TGCTATTAGA AGGCGGTATT
ATCAGCTACG AGACCAACAC CAGCACCGGC GGCACAGGGG TGGAATACTA TGGCATCGGC
GCCTCGGAAA TGTACCGTGA GGATTTAGTC ACTATCTATC TGCGCGCGGT CGATGTGCAC
ACGGGGAAAG TGATGATGTC TGTATCTACG AGTAAAAGGG TACTTTCGCA GGAAATGCGT
GCAGGTCTGT TCCGCTATAC CAGTTTGAAT CGTTTGGCCG AGGCGGAAGT CGGTTTTACC
ACTAACGAGC CAGTGCAATT TTGCGTGTTG CAGGCTATCG AACTCGCGGT TGCCGAGTTG
ATTGATAAGG GCATTAAGCA AGGTTATTGG AGTCAGGCTC AGGTGAGACA ACCCGCTGAA
AGACAGCAGG AGTTGAGCCA AGGTTAA
 
Protein sequence
MTRLVFIALM LLSMSACSLI PKPDLNITPA QVNPMSEVMK GLQNQPGPKF PIPVAVYSFR 
DQTGQYKPQA NVSSFSTAVT QGATSMLMQT LIDSKWFTPV EREGLQNLLT ERKISNKQNG
TKGDDIPVLS TARLLLEGGI ISYETNTSTG GTGVEYYGIG ASEMYREDLV TIYLRAVDVH
TGKVMMSVST SKRVLSQEMR AGLFRYTSLN RLAEAEVGFT TNEPVQFCVL QAIELAVAEL
IDKGIKQGYW SQAQVRQPAE RQQELSQG