Gene Shewana3_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3233 
Symbol 
ID4477342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3878146 
End bp3878703 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content49% 
IMG OID639727843 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_870863 
Protein GI117921671 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0748] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0067733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.916764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG AAATCTCCGA GCAAGAACAA CGTTTAAGGG ACAAACTGTT ACCCGAAATT 
GAGGCCTTTA AACAGCAGCG CCATACTTTG CAACTCGCAA CAGTCGATAC GGATGGGCAA
CCCAATGCCA GTTATGCGCC ATTTGCCTTA GCCGACGATG GGTTTTACAT CTTAGTGAGT
GACTTAGCGC GTCACGGCCA CAACCTTAAG CAGTCGACCA AAGTGTCTGT GATGCTGGTG
GAGGATGAAG CCGAAGCTAA GTCTGTATTC GCCCGTAAAC GCCTCACTTT CGATGCTCTG
GCTCAAGCGG TTGAGCGGGA TACGCCCTCG TTTAGTAAGG GAGTCAGCCT GTTATCAAAA
CGCTTTGGCG ACATGTCCGA TAATCTCGCG GCACTGACGG ACTTTAATCT GTATAAGTTA
GCGCCCCATC AGGGATTGTA TGTGAAAGGT TTTGGTCAAG CCTTTAGTTT GACGGGCAGT
GAATTACTCG ATGTTAACTG GAAGCGAGAT GGCCACCATG GCACACCTAA AGCGCCCGAA
GATATGCGAG TAGCTTAA
 
Protein sequence
MKPEISEQEQ RLRDKLLPEI EAFKQQRHTL QLATVDTDGQ PNASYAPFAL ADDGFYILVS 
DLARHGHNLK QSTKVSVMLV EDEAEAKSVF ARKRLTFDAL AQAVERDTPS FSKGVSLLSK
RFGDMSDNLA ALTDFNLYKL APHQGLYVKG FGQAFSLTGS ELLDVNWKRD GHHGTPKAPE
DMRVA