Gene Shewana3_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3228 
Symbol 
ID4477337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3871232 
End bp3872665 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content49% 
IMG OID639727838 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_870858 
Protein GI117921666 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.12962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAGA GTGACCCCCT ACAGAGTGAG AACGCCAAGC GCTCCTCTGC CGAGCAATTT 
ATCCCCGTAA AAAATATCCA GGCGGACGAT AAGCCTGCAC ATAAAAGCAG TGGCCAGATT
CATTTCCGTG AACAGAAGGG CTATTTTCAA CGCCTGAGAA CCACAATGAA TAGCCTATTA
GTACTGCTGT TTTTTGCCCT ACCCTTTATT TCCTTTGATG GTCGGCAAGC GATATTGCTG
GATGTGAGTC AGCAACAGTT CTTCTTTTTT GGCCTCACGC TCTGGCCACA GGATTTCACC
TTACTCGCTT GGGTCTTTAT TGCCGCCGCC TTTGGATTGT TTTTCATCAC AGTGTTTTGG
GGGCGCGTCT GGTGTGGCTA TCTTTGCCCG CAAACCGCGT GGACTTTTAT GTTTGTCTGG
CTCGAGAGCC GGATTGAGGG CAACAGCAAC AAACGTAAAT TGCTCGATAA GGCGCCATGG
TCAGCCAATA AACTCGGTAA AAGAAGTCTC AAACACGGTC TGTGGGGATT AGCCGCCTTA
ATTACTGGCT GTGGATTTAT CGGTTATTTC ATCCCCGCCC GCGAACTCTA TTTGGATATT
TTTACCGGCA ACGCCGGCTT TTGGACGACC TGCTGGGTAT GGTTTTTCGC GATTTGTACT
TACTTAAATG CAGGCTGGAT GCGCGAGCAA ATGTGCTTAC ACTGCTGCCC CTATGCGCGT
TTTCAGGCAG TGATGTTCGA TGCCAACACC AAAACTGTGA CCTATGATGC CGCACGCGGC
GAAGCGCGCG GCCCACGTAA GCGTAAACAA CCGACTGAAC TCGGTGATTG TGTTGACTGT
AACTTATGTG TCGAAGTCTG CCCGACGGGG ATTGATATTC GCCAAGGCCT CCAATACGAG
TGTATTAACT GCGGCGCCTG TGTCGATGCC TGTAATGAAA CCATGCAAAA ATTCGACTAC
AAACAAAACC TAATTAGCTA TGTCAGCGAG AGTGAATTAA AGGGCATCGC TCATTCCAAC
TGGCGCTCGC CACGCTTTTT AGGTTACGGC GCCGCCGTTG TCATTATGTT GGTTGTGATA
GGTTTAGATC TCTCCAGCCG CAGTGAGATT CAACTTAACG TCATTCGCGA CAGGCAGAGC
CTATACCGCG AAACCGCCGA TAATAAAGTT GAAAATACCT ACCAGCTGAA GATCCGTAAC
AAGACTCAGC AAACCAAGCA ATATCAACTC GCGGTCAACA GCGAAATGCC CTTCAGCTTA
ATTGCCGATC CTGTCATTAC CCTCGCTCCG GGCGAGCAAT CGGATTATCC CGTGACTGTA
TTAGCTGATA AGGATGCAAT CCCAGCGGGG CGCAAAATTA TCGAATTCTC GGTAACGGAT
GTCAGCAAAC CTGAACAAAG CGTTAGCCAA GAAACCGGCT TCTTTAGCCC TTAG
 
Protein sequence
MPKSDPLQSE NAKRSSAEQF IPVKNIQADD KPAHKSSGQI HFREQKGYFQ RLRTTMNSLL 
VLLFFALPFI SFDGRQAILL DVSQQQFFFF GLTLWPQDFT LLAWVFIAAA FGLFFITVFW
GRVWCGYLCP QTAWTFMFVW LESRIEGNSN KRKLLDKAPW SANKLGKRSL KHGLWGLAAL
ITGCGFIGYF IPARELYLDI FTGNAGFWTT CWVWFFAICT YLNAGWMREQ MCLHCCPYAR
FQAVMFDANT KTVTYDAARG EARGPRKRKQ PTELGDCVDC NLCVEVCPTG IDIRQGLQYE
CINCGACVDA CNETMQKFDY KQNLISYVSE SELKGIAHSN WRSPRFLGYG AAVVIMLVVI
GLDLSSRSEI QLNVIRDRQS LYRETADNKV ENTYQLKIRN KTQQTKQYQL AVNSEMPFSL
IADPVITLAP GEQSDYPVTV LADKDAIPAG RKIIEFSVTD VSKPEQSVSQ ETGFFSP