Gene Shewana3_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_3215 
Symbol 
ID4477307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp3859343 
End bp3859816 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content51% 
IMG OID639727825 
Producthypothetical protein 
Protein accessionYP_870845 
Protein GI117921653 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.488511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT TACTGTGGAC GCTATTGCAC GATGCCTTTT TCTCAGCAAT TCCCGCTGTC 
GGCTTTGCCA TGGTGTTTAA CGTGCCGAAA CGTTTCTTAC CCTACTGCGC GCTTGCAGGC
GCTATAGGGC ATAGCTCACG CACGCTAATG TTGCAATTTG GCTTGCCTAT CGAATGGGCG
ACCTTTGCCG CCGCGGCTTT AGTGGGAACT ATCACTATCG GCTTTGCCAA GCGTCACCTC
GCGCCGCCCT TGATGTATGC CGTTGCGGCG ATTATCCCGA TGATCCCTGG CACCTACGCT
TTTAATACTG TAATAGCCCT AGTGCAATTA ACGGCGCAGT CGCAGGTCAG CCAAGAACTG
ACTGGACAAG TGATCAGTAA CGGCTTAAAA ACCGTGTTTA TTTTAGGCGC GCTGTCGGTG
GGCCTTGCTT TACCTAGTCT GCTGTATTTT AGAACCCGCC CTGTTATTCA ATAA
 
Protein sequence
MIALLWTLLH DAFFSAIPAV GFAMVFNVPK RFLPYCALAG AIGHSSRTLM LQFGLPIEWA 
TFAAAALVGT ITIGFAKRHL APPLMYAVAA IIPMIPGTYA FNTVIALVQL TAQSQVSQEL
TGQVISNGLK TVFILGALSV GLALPSLLYF RTRPVIQ