| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3197 |
|---|
| Symbol | purT |
|---|
| ID | 4478260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 3835696 |
|---|
| End bp | 3836871 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639727807 |
|---|
| Product | phosphoribosylglycinamide formyltransferase 2 |
|---|
| Protein accession | YP_870827 |
|---|
| Protein GI | 117921635 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
|---|
| TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.862074 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGGAA CTCCCTACAC AGAGGGCGCT CGACGCGCCA TGTTGCTTGG CTGCGGTGAG
CTAGGTAAAG AAGTCGCCAT CGAGCTCCAA CGCTTAGGTG TTGAAGTGAT TGGCGTCGAT
CGTTATCCTA ATGCCCCTGC CATGCAAATT GCCCATCGCT CCCATGTGAT CAATATGCTC
GACGCTAAAG CGCTTCGCGC CATTATCGAG CTAGAAAAGC CCCACTTAGT GATCCCCGAA
ATTGAAGCCA TCGCCACTCA GACCTTGGTC GAGATGGAAA CCGAAGGCCT CAATGTCGTG
CCGACCGCAC GCGCGACTCA GCTGACCATG GACAGAGAAG GTATTCGTCG CCTCGCAGCC
GAAACCTTAG GTCTACCGAC CTCCCCCTAT TTCTTCTGCG ACACTGAAAC CGAGTTTAAT
CAAGCCATTG GCAAGATTGG CGTACCCTGC GTGGTCAAAC CCGTGATGAG TTCATCGGGC
AAGGGCCAGA GTGTTATCCG TGATGCGGCC CAAAGCACCA AAGCTTGGCA ATACGCCCAA
GAAGGCGGCC GCGCGGGCGG TGGCCGTGTG ATTGTTGAAG GCTTTATCCC CTTCGATTAC
GAAATTACCC TGCTGACCAT TAGTGCGGTT AACGGCATCC ACTTCTGCGC GCCAATTGGC
CACAGACAAG AAGACGGCGA CTACCGCGAG TCATGGCAAC CTCAAGCCAT GTCGGCCGAC
GTGCTGGCAA AATCCCAAGC AATCGCCAGC AAAGTGGTCG AAGCCCTCGG CGGTTATGGC
TTATTTGGGG TCGAGCTGTT TGTGAAGGGG AGCGATGTGT ACTTCTCTGA AGTCTCGCCT
CGTCCGCACG ATACCGGTTT AGTCACCTTA ATTAGCCAAG ATTTATCCGA GTTTGCACTG
CACGTTAGGG CGATTCTTGG TTTGCCCATT CCGAATATCC ACCAACATGG CCCCAGCGCC
TCGGCGGTAG TATTGGTGGA AGGCAAATCG AAAAACATTC GCTATCAAGG TCTTGCCGAT
GCATTGGCGG CGGAAAATAC TCAGCTCAGA TTATTCGCTA AACCTGAAAT CGATGGTCGC
CGCCGTTTAG GGGTGGCCCT CGCCCGCGAT AAGGATATCG AAAGCGCAGT CAACAAAGCG
TTGGATAGTG CATCTAAGGT AAAAGTGATT TTCTAG
|
|---|
| Protein sequence | MIGTPYTEGA RRAMLLGCGE LGKEVAIELQ RLGVEVIGVD RYPNAPAMQI AHRSHVINML
DAKALRAIIE LEKPHLVIPE IEAIATQTLV EMETEGLNVV PTARATQLTM DREGIRRLAA
ETLGLPTSPY FFCDTETEFN QAIGKIGVPC VVKPVMSSSG KGQSVIRDAA QSTKAWQYAQ
EGGRAGGGRV IVEGFIPFDY EITLLTISAV NGIHFCAPIG HRQEDGDYRE SWQPQAMSAD
VLAKSQAIAS KVVEALGGYG LFGVELFVKG SDVYFSEVSP RPHDTGLVTL ISQDLSEFAL
HVRAILGLPI PNIHQHGPSA SAVVLVEGKS KNIRYQGLAD ALAAENTQLR LFAKPEIDGR
RRLGVALARD KDIESAVNKA LDSASKVKVI F
|
|---|
| |