Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_3184 |
Symbol | |
ID | 4478247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 3822799 |
End bp | 3823512 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639727794 |
Product | two component transcriptional regulator |
Protein accession | YP_870814 |
Protein GI | 117921622 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0220819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAATC CACAATCACC CCACAGAGTG TTATTGGTTG AAGACGATGT CCGTCTTGCG AATTTAATCG TAGATTATTT GAAATCACAC GGTATGCACG TTGAAGTCGA GCGCCGCGGT GACACAGTCT TAACCCGCTT AATCAACTAC AAGCCCGATA TCATACTGCT AGACATTATG TTGCCAGGTC TAGATGGCCT TAGCCTGTGT GAAAAGCTGC CCGATTACTT TGCCGGCCCT ATCCTGCTGA TGAGTGCCCT AGGGTCGAGC GAAGATCAGA TCAAAGGCTT AGAACTCGGT GCCGACGACT ATGTGGTGAA ACCCGTCGAC CCCGCGCTGC TGGTTGCTCG TATCAACAAC CTATTACGTC GCCAAAACCA ACCGCCGCAG GCCGAATCCC ACTGCCTGAC CTTTGGTAAG CTGAGTATCG ATCCCCATAC CCATGCTATC CGCCTCGACA ATAAAGAAGT CGATCTCACC AGCCATGAGT TTGAACTCCT CTGGTTACTG GCCTCACAAG CGGGACAAGT GCTGAGCCGT CAGTACATCT ATCAATTACT GCTTAACATT GATTTTGATG GTAAAGATAG AAAGATAGAC GTACGTATTT CAAGGCTGCG TAAAAAGCTC AACGACAATA TCGAGACCCC ATTCAGAATT AAAACCGTCT GGGGACAGGG TTATCTCTTC GCCCCCGAGG CTTGGAACAA CTAA
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Protein sequence | MTNPQSPHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM LPGLDGLSLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLDNKEVDLT SHEFELLWLL ASQAGQVLSR QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN
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